myRT

myRT report for GCA_013416955.1_ASM1341695v1

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Seq: VPEV01000002.1 Acinetobacter sp. YH1901130 NODE_2_length_198633_cov_61.979008, whole genome shotgun sequence (198633 bp)
Overview 1 RT 1: 158859-162719 bp Neighborhood of RT #1 [158859, 162727] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 158859-159524 bp Feature: gene Location: 159659-160171 bp Feature: domain Description: PHA02517 Location: 159686-160151 bp Feature: domain Description: PHA0251 7 Location: 1 59686-1 601 51 bp Feature: gene Location: 160224-161465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160422-161079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 60422-1 61 079 bp Feature: domain Description: GIIM Note: maturase Location: 161157-161388 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 1 57-1 61 388 bp Feature: gene Location: 161958-162410 bp Feature: domain Description: PHA02517 Location: 162024-162390 bp Feature: domain Description: PHA0251 7 Location: 1 62024-1 62390 bp Feature: gene Location: 162410-162727 bp Feature: domain Description: InsE Location: 162422-162719 bp Feature: domain Description: InsE Location: 1 62422-1 6271 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: VPEV01000045.1 Acinetobacter sp. YH1901130 NODE_43_length_24000_cov_113.550999, whole genome shotgun sequence (24000 bp)
Overview 1 RT 1: 20095-23224 bp Neighborhood of RT #1 [20095, 23241] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII HMA HMA Feature: gene Location: 20095-21516 bp Feature: domain Description: LZ_Tnp_IS66 Location: 20287-20512 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2 02 87-2 0512 bp Feature: domain Description: zf-IS66 Location: 20536-20662 bp Feature: domain Description: zf-IS66 Location: 2 0536-2 0662 bp Feature: domain Description: DDE_Tnp_IS66 Location: 20704-21496 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 0704-2 1496 bp Feature: gene Location: 21842-22009 bp Feature: gene Location: 22056-22568 bp Feature: RT Description: RVT_N Location: 22116-22359 bp Feature: RT Description: RVT_N Location: 2 2 116-2 2 359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22404-22539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 404-2 2 539 bp Feature: gene Location: 22625-22870 bp Feature: domain Description: HMA Location: 22667-22847 bp Feature: domain Description: HMA Location: 2 2 667-2 2 847 bp Feature: gene Location: 23047-23241 bp Feature: domain Description: HMA Location: 23056-23224 bp Feature: domain Description: HMA Location: 2 3056-2 32 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, HMA (pfam00403)