myRT

myRT report for GCA_013417075.1_ASM1341707v1

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Seq: VPES01000002.1 Acinetobacter sp. YH16057 NODE_2_length_224084_cov_38.060101, whole genome shotgun sequence (224084 bp)
Overview 1 RT 1: 200026-203874 bp Neighborhood of RT #1 [200026, 203879] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 200026-200691 bp Feature: gene Location: 200827-201339 bp Feature: domain Description: PHA02517 Location: 200854-201319 bp Feature: domain Description: PHA0251 7 Location: 200854-201 31 9 bp Feature: gene Location: 201392-202633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201590-202247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 590-202247 bp Feature: domain Description: GIIM Note: maturase Location: 202325-202556 bp Feature: domain Description: GIIM Note: maturase Location: 202325-202556 bp Feature: gene Location: 203125-203562 bp Feature: domain Description: PHA02517 Location: 203191-203542 bp Feature: domain Description: PHA0251 7 Location: 2031 91 -203542 bp Feature: gene Location: 203733-203879 bp Feature: domain Description: InsE Location: 203748-203874 bp Feature: domain Description: InsE Location: 203748-203874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: VPES01000037.1 Acinetobacter sp. YH16057 NODE_36_length_21535_cov_56.458894, whole genome shotgun sequence (21535 bp)
Overview 1 RT 1: 5769-10079 bp Neighborhood of RT #1 [5769, 10177] DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C HTH_XRE Feature: gene Location: 5769-7211 bp Feature: domain Description: DUF3287 Location: 5793-5952 bp Feature: domain Description: DUF32 87 Location: 5793-5952 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5982-6207 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5982 -62 07 bp Feature: domain Description: zf-IS66 Location: 6231-6357 bp Feature: domain Description: zf-IS66 Location: 62 31-6357 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6399-7191 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6399-7191 bp Feature: gene Location: 7537-7704 bp Feature: gene Location: 7751-9427 bp Feature: RT Description: RVT_N Location: 7811-8054 bp Feature: RT Description: RVT_N Location: 7811-8054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8099-8735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8099-8735 bp Feature: domain Description: GIIM Note: maturase Location: 8789-9020 bp Feature: domain Description: GIIM Note: maturase Location: 8789-902 0 bp Feature: gene Location: 9541-9759 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9625-9736 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 962 5-9736 bp Feature: gene Location: 9938-10177 bp Feature: domain Description: HTH_XRE Location: 9947-10079 bp Feature: domain Description: HTH_XRE Location: 9947-10079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), HTH_XRE (smart00530)

Seq: VPES01000003.1 Acinetobacter sp. YH16057 NODE_3_length_210111_cov_39.396511, whole genome shotgun sequence (200337 bp)
Overview 1 RT 1: 157743-163140 bp Neighborhood of RT #1 [157743, 163289] PRK12563 PRK05506 RVT-Retrons PadR Feature: gene Location: 157743-158657 bp Feature: domain Description: PRK12563 Location: 157758-158655 bp Feature: domain Description: PRK12563 Location: 157758-158655 bp Feature: gene Location: 158810-160423 bp Feature: domain Description: PRK05506 Location: 158813-160211 bp Feature: domain Description: PRK05506 Location: 158813 -160211 bp Feature: gene Location: 160758-161957 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 160905-161457 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 160905-161457 bp Feature: gene Location: 161947-162672 bp Feature: gene Location: 162768-163289 bp Feature: domain Description: PadR Location: 162834-163140 bp Feature: domain Description: PadR Location: 16283 4-163 140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12563 (sulfate adenylyltransferase subunit CysD), PRK05506 (bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional), RVT-Retrons, PadR (pfam03551)

Seq: VPES01000048.1 Acinetobacter sp. YH16057 NODE_47_length_13103_cov_4247.396501, whole genome shotgun sequence (13103 bp)
Overview 1 RT 1: 5917-8394 bp Neighborhood of RT #1 [5917, 8417] HTH_XRE RVT-Retrons PHA02518 Feature: gene Location: 5917-6081 bp Feature: gene Location: 6142-6471 bp Feature: domain Description: HTH_XRE Location: 6157-6319 bp Feature: domain Description: HTH_XRE Location: 6157-6319 bp Feature: gene Location: 6419-7342 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6605-7145 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6605-714 5 bp Feature: gene Location: 7380-7676 bp Feature: gene Location: 7677-8417 bp Feature: domain Description: PHA02518 Location: 7779-8394 bp Feature: domain Description: PHA02518 Location: 7779-8394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PHA02518 (ParA-like protein; Provisional)