myRT

myRT report for GCA_013417235.1_ASM1341723v1

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Seq: VPEI01000032.1 Acinetobacter sp. YH16040 NODE_31_length_35636_cov_62.491875, whole genome shotgun sequence (35636 bp)
Overview 1 RT 1: 30446-34292 bp Neighborhood of RT #1 [30446, 34300] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 30446-31111 bp Feature: gene Location: 31247-31759 bp Feature: domain Description: PHA02517 Location: 31274-31739 bp Feature: domain Description: PHA0251 7 Location: 31 274-31 739 bp Feature: gene Location: 31812-33053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32010-32667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3201 0-32667 bp Feature: domain Description: GIIM Note: maturase Location: 32745-32976 bp Feature: domain Description: GIIM Note: maturase Location: 32745-32976 bp Feature: gene Location: 33546-33983 bp Feature: domain Description: PHA02517 Location: 33609-33963 bp Feature: domain Description: PHA0251 7 Location: 33609-33963 bp Feature: gene Location: 33983-34300 bp Feature: domain Description: InsE Location: 33998-34292 bp Feature: domain Description: InsE Location: 33998-34292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: VPEI01000048.1 Acinetobacter sp. YH16040 NODE_47_length_16632_cov_226.063375, whole genome shotgun sequence (16632 bp)
Overview 1 RT 1: 8341-11880 bp Neighborhood of RT #1 [8341, 11909] HMA HMA RVT_N RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 8341-8535 bp Feature: domain Description: HMA Location: 8350-8518 bp Feature: domain Description: HMA Location: 8350-8518 bp Feature: gene Location: 8712-8957 bp Feature: domain Description: HMA Location: 8754-8934 bp Feature: domain Description: HMA Location: 8754-8934 bp Feature: gene Location: 9014-9526 bp Feature: RT Description: RVT_N Location: 9074-9317 bp Feature: RT Description: RVT_N Location: 9074-9317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9362-9497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9362 -9497 bp Feature: gene Location: 10066-11445 bp Feature: domain Description: LZ_Tnp_IS66 Location: 10216-10441 bp Feature: domain Description: LZ_Tnp_IS66 Location: 102 16-10441 bp Feature: domain Description: zf-IS66 Location: 10465-10591 bp Feature: domain Description: zf-IS66 Location: 10465-10591 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10633-11425 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10633-1142 5 bp Feature: gene Location: 11520-11909 bp Feature: domain Description: TnpB_IS66 Location: 11592-11880 bp Feature: domain Description: TnpB_IS66 Location: 11592 -11880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717), HMA (pfam00403), RVT_N (pfam13655), RVT-GII