myRT

myRT report for GCA_013417245.1_ASM1341724v1

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Seq: VPEJ01000025.1 Acinetobacter sp. YH16042 NODE_25_length_45709_cov_271.381708, whole genome shotgun sequence (45709 bp)
Overview 1 RT 1: 13021-15298 bp Neighborhood of RT #1 [13021, 15318] HMA HMA RVT_N RVT-GII DDE_Tnp_IS66 Feature: gene Location: 13021-13215 bp Feature: domain Description: HMA Location: 13030-13198 bp Feature: domain Description: HMA Location: 1 3030-1 31 98 bp Feature: gene Location: 13392-13637 bp Feature: domain Description: HMA Location: 13434-13614 bp Feature: domain Description: HMA Location: 1 3434-1 361 4 bp Feature: gene Location: 13694-14206 bp Feature: RT Description: RVT_N Location: 13754-13997 bp Feature: RT Description: RVT_N Location: 1 3754-1 3997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14042-14177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4042-1 41 77 bp Feature: gene Location: 14234-14413 bp Feature: gene Location: 14746-15318 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14758-15298 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 4758-1 5298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), RVT_N (pfam13655), RVT-GII, DDE_Tnp_IS66 (pfam03050)

Seq: VPEJ01000008.1 Acinetobacter sp. YH16042 NODE_8_length_148174_cov_101.531824, whole genome shotgun sequence (148174 bp)
Overview 1 RT 1: 71887-77284 bp Neighborhood of RT #1 [71887, 77433] PRK12563 PRK05506 RVT-Retrons PadR Feature: gene Location: 71887-72801 bp Feature: domain Description: PRK12563 Location: 71902-72799 bp Feature: domain Description: PRK12 563 Location: 71902 -72 799 bp Feature: gene Location: 72954-74567 bp Feature: domain Description: PRK05506 Location: 72957-74403 bp Feature: domain Description: PRK05506 Location: 72 957-74403 bp Feature: gene Location: 74902-76101 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75049-75601 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75049-75601 bp Feature: gene Location: 76091-76816 bp Feature: gene Location: 76912-77433 bp Feature: domain Description: PadR Location: 76978-77284 bp Feature: domain Description: PadR Location: 76978-772 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12563 (sulfate adenylyltransferase subunit CysD), PRK05506 (bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional), RVT-Retrons, PadR (pfam03551)