myRT

myRT report for GCA_013417265.1_ASM1341726v1

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Seq: VPEF01000038.1 Acinetobacter sp. YH16037 NODE_36_length_32932_cov_74.694315, whole genome shotgun sequence (32932 bp)
Overview 1 RT 1: 14465-18775 bp Neighborhood of RT #1 [14465, 18873] DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C HTH_XRE Feature: gene Location: 14465-15907 bp Feature: domain Description: DUF3287 Location: 14489-14648 bp Feature: domain Description: DUF3287 Location: 1 4489-1 4648 bp Feature: domain Description: LZ_Tnp_IS66 Location: 14678-14903 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 4678-1 4903 bp Feature: domain Description: zf-IS66 Location: 14927-15053 bp Feature: domain Description: zf-IS66 Location: 1 4927-1 5053 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15095-15887 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 5095-1 5887 bp Feature: gene Location: 16233-16400 bp Feature: gene Location: 16447-18123 bp Feature: RT Description: RVT_N Location: 16507-16750 bp Feature: RT Description: RVT_N Location: 1 6507-1 6750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16795-17431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6795-1 7431 bp Feature: domain Description: GIIM Note: maturase Location: 17485-17716 bp Feature: domain Description: GIIM Note: maturase Location: 1 7485-1 771 6 bp Feature: gene Location: 18237-18455 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18321-18432 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 8321 -1 8432 bp Feature: gene Location: 18634-18873 bp Feature: domain Description: HTH_XRE Location: 18643-18775 bp Feature: domain Description: HTH_XRE Location: 1 8643-1 8775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), HTH_XRE (smart00530)