myRT

myRT report for GCA_013417475.1_ASM1341747v1

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Seq: VPDX01000034.1 Acinetobacter sp. YH12249 NODE_33_length_26011_cov_47.263638, whole genome shotgun sequence (26011 bp)
Overview 1 RT 1: 2735-6274 bp Neighborhood of RT #1 [2735, 6303] HMA HMA RVT_N RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 2735-2929 bp Feature: domain Description: HMA Location: 2744-2912 bp Feature: domain Description: HMA Location: 2744-291 2 bp Feature: gene Location: 3106-3351 bp Feature: domain Description: HMA Location: 3148-3328 bp Feature: domain Description: HMA Location: 31 48-3328 bp Feature: gene Location: 3408-3920 bp Feature: RT Description: RVT_N Location: 3468-3711 bp Feature: RT Description: RVT_N Location: 3468-371 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3756-3891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3756-3891 bp Feature: gene Location: 4460-5839 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4610-4835 bp Feature: domain Description: LZ_Tnp_IS66 Location: 461 0-4835 bp Feature: domain Description: zf-IS66 Location: 4859-4985 bp Feature: domain Description: zf-IS66 Location: 4859-4985 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5027-5819 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5027-581 9 bp Feature: gene Location: 5914-6303 bp Feature: domain Description: TnpB_IS66 Location: 5986-6274 bp Feature: domain Description: TnpB_IS66 Location: 5986-6274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), RVT_N (pfam13655), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)