myRT

myRT report for GCA_013418165.1_ASM1341816v1

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Seq: VPCN01000167.1 Acinetobacter sp. YH12158 NODE_164_length_1924_cov_275.730662, whole genome shotgun sequence (1924 bp)
Overview 1 RT 1: 54-1537 bp Neighborhood of RT #1 [54, 1923] RVT_N RVT-GII GIIM Feature: gene Location: 54-221 bp Feature: gene Location: 283-1923 bp Feature: RT Description: RVT_N Location: 328-571 bp Feature: RT Description: RVT_N Location: 328-571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 616-1252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 6-1 252 bp Feature: domain Description: GIIM Note: maturase Location: 1306-1537 bp Feature: domain Description: GIIM Note: maturase Location: 1 306-1 537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VPCN01000049.1 Acinetobacter sp. YH12158 NODE_46_length_30059_cov_51.342376, whole genome shotgun sequence (30059 bp)
Overview 1 RT 1: 20918-24920 bp Neighborhood of RT #1 [20918, 25162] MobC RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 20918-21427 bp Feature: domain Description: MobC Location: 21179-21263 bp Feature: domain Description: MobC Location: 2 1179-2 12 63 bp Feature: gene Location: 21809-21952 bp Feature: gene Location: 22027-22968 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22138-22732 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 138-2 2 732 bp Feature: gene Location: 22969-24513 bp Feature: domain Description: COG3950 Location: 23143-24292 bp Feature: domain Description: COG3950 Location: 2 3143-2 42 92 bp Feature: gene Location: 24518-25162 bp Feature: domain Description: TIGR02646 Location: 24611-24920 bp Feature: domain Description: TIGR02 646 Location: 2 4611-2 492 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)