myRT

myRT report for GCA_013418235.1_ASM1341823v1

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Seq: VPCL01000013.1 Acinetobacter sp. YH12156 NODE_10_length_162721_cov_57.453036, whole genome shotgun sequence (162721 bp)
Overview 1 RT 1: 87-2200 bp Neighborhood of RT #1 [87, 2220] InsE RVT_N RVT-GII DDE_Tnp_IS66 Feature: gene Location: 87-335 bp Feature: domain Description: InsE Location: 120-327 bp Feature: domain Description: InsE Location: 1 20-327 bp Feature: gene Location: 431-1327 bp Feature: RT Description: RVT_N Location: 491-734 bp Feature: RT Description: RVT_N Location: 491 -734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779-1289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779-1 289 bp Feature: gene Location: 1355-1534 bp Feature: gene Location: 1867-2220 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1870-2200 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 870-2200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, InsE (COG2963)

Seq: VPCL01000008.1 Acinetobacter sp. YH12156 NODE_6_length_183441_cov_89.059134, whole genome shotgun sequence (88425 bp)
Overview 1 RT 1: 78341-81400 bp Neighborhood of RT #1 [78341, 81408] PHA02517 RVT-GII PHA02517 InsE Feature: gene Location: 78341-78853 bp Feature: domain Description: PHA02517 Location: 78368-78833 bp Feature: domain Description: PHA02 517 Location: 78368-78833 bp Feature: gene Location: 78906-79079 bp Feature: gene Location: 79167-80147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79365-80022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79365-8002 2 bp Feature: gene Location: 80633-81091 bp Feature: domain Description: PHA02517 Location: 80699-81026 bp Feature: domain Description: PHA02 517 Location: 80699-8102 6 bp Feature: gene Location: 81091-81408 bp Feature: domain Description: InsE Location: 81103-81400 bp Feature: domain Description: InsE Location: 81103-81400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, InsE (COG2963)