myRT

myRT report for GCA_013418865.1_ASM1341886v1

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Seq: VPBF01000014.1 Acinetobacter sp. YH12117 NODE_14_length_64428_cov_90.952940, whole genome shotgun sequence (64428 bp)
Overview 1 RT 1: 38270-42156 bp Neighborhood of RT #1 [38270, 42156] CzcD RVT-G2L FNR1 Feature: gene Location: 38270-38887 bp Feature: domain Description: CzcD Location: 38318-38861 bp Feature: domain Description: CzcD Location: 3831 8-38861 bp Feature: gene Location: 39110-39616 bp Feature: gene Location: 39627-40832 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 39843-40518 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 39843-4051 8 bp Feature: gene Location: 40875-41654 bp Feature: domain Description: FNR1 Location: 40899-41637 bp Feature: domain Description: FNR1 Location: 40899-41 637 bp Feature: gene Location: 41917-42156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CzcD (COG1230), RVT-G2L, FNR1 (cd06195)

Seq: VPBF01000029.1 Acinetobacter sp. YH12117 NODE_28_length_39128_cov_53.870157, whole genome shotgun sequence (39128 bp)
Overview 1 RT 1: 18477-20787 bp Neighborhood of RT #1 [18477, 20807] HMA HMA RVT_N RVT-GII DDE_Tnp_IS66 Feature: gene Location: 18477-18650 bp Feature: domain Description: HMA Location: 18480-18633 bp Feature: domain Description: HMA Location: 18480-18633 bp Feature: gene Location: 18884-19072 bp Feature: domain Description: HMA Location: 18887-19049 bp Feature: domain Description: HMA Location: 18887-19049 bp Feature: gene Location: 19129-19641 bp Feature: domain Description: RVT_N Location: 19189-19432 bp Feature: domain Description: RVT_N Location: 19189-19432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19477-19612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19477-19612 bp Feature: gene Location: 19669-19848 bp Feature: gene Location: 20181-20807 bp Feature: domain Description: DDE_Tnp_IS66 Location: 20187-20787 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 0187-2 0787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), RVT_N (pfam13655), RVT-GII, DDE_Tnp_IS66 (pfam03050)