myRT

myRT report for GCA_013418895.1_ASM1341889v1

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Seq: VPBE01000025.1 Acinetobacter sp. YH12116 NODE_25_length_26757_cov_14.753361, whole genome shotgun sequence (26757 bp)
Overview 1 RT 1: 12833-15113 bp Neighborhood of RT #1 [12833, 15130] DDE_Tnp_IS66 RVT_N RVT-GII HMA HMA Feature: gene Location: 12833-13405 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12848-13385 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 2848-1 3385 bp Feature: gene Location: 13731-13898 bp Feature: gene Location: 13945-14457 bp Feature: domain Description: RVT_N Location: 14005-14248 bp Feature: domain Description: RVT_N Location: 1 4005-1 4248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14293-14428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4293-1 4428 bp Feature: gene Location: 14514-14759 bp Feature: domain Description: HMA Location: 14556-14736 bp Feature: domain Description: HMA Location: 1 4556-1 4736 bp Feature: gene Location: 14936-15130 bp Feature: domain Description: HMA Location: 14945-15113 bp Feature: domain Description: HMA Location: 1 4945-1 51 1 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, HMA (pfam00403)

Seq: VPBE01000041.1 Acinetobacter sp. YH12116 NODE_41_length_16512_cov_51.968569, whole genome shotgun sequence (16512 bp)
Overview 1 RT 1: 242-3930 bp Neighborhood of RT #1 [242, 3974] PinE RVT-G2L DDE_Tnp_1_5 DDE_Tnp_1 Feature: gene Location: 242-823 bp Feature: domain Description: PinE Location: 272-818 bp Feature: domain Description: PinE Location: 2 72 -818 bp Feature: gene Location: 1204-1713 bp Feature: gene Location: 1741-2937 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 1957-2623 bp Feature: RT Description: RVT-G2 L Note: G2 L RT Location: 1957-2 62 3 bp Feature: gene Location: 3034-3291 bp Feature: domain Description: DDE_Tnp_1_5 Location: 3103-3286 bp Feature: domain Description: DDE_Tnp_1_5 Location: 3103-32 86 bp Feature: gene Location: 3414-3974 bp Feature: domain Description: DDE_Tnp_1 Location: 3429-3930 bp Feature: domain Description: DDE_Tnp_1 Location: 342 9-3930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-G2L, DDE_Tnp_1_5 (pfam13737), DDE_Tnp_1 (pfam01609)