myRT

myRT report for GCA_013418945.1_ASM1341894v1

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Seq: VPBA01000015.1 Acinetobacter sp. YH12112 NODE_15_length_73689_cov_24.159743, whole genome shotgun sequence (73689 bp)
Overview 1 RT 1: 11425-17108 bp Neighborhood of RT #1 [11425, 17128] SUL1 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 11425-12885 bp Feature: domain Description: SUL1 Location: 11428-12877 bp Feature: domain Description: SUL1 Location: 1 1 428-1 2877 bp Feature: gene Location: 13000-13218 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 13084-13195 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 3084-1 31 95 bp Feature: gene Location: 13332-15008 bp Feature: domain Description: RVT_N Location: 13392-13635 bp Feature: domain Description: RVT_N Location: 1 3392-1 3635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13680-14316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3680-1 431 6 bp Feature: domain Description: GIIM Note: maturase Location: 14370-14601 bp Feature: domain Description: GIIM Note: maturase Location: 1 4370-1 4601 bp Feature: gene Location: 15036-15215 bp Feature: gene Location: 15548-17128 bp Feature: domain Description: DUF3287 Location: 15680-15848 bp Feature: domain Description: DUF3287 Location: 1 5680-1 5848 bp Feature: domain Description: LZ_Tnp_IS66 Location: 15899-16124 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 5899-1 61 24 bp Feature: domain Description: zf-IS66 Location: 16148-16274 bp Feature: domain Description: zf-IS66 Location: 1 61 48-1 6274 bp Feature: domain Description: DDE_Tnp_IS66 Location: 16316-17108 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 631 6-1 71 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SUL1 (COG0659), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: VPBA01000003.1 Acinetobacter sp. YH12112 NODE_3_length_137789_cov_65.394640, whole genome shotgun sequence (137789 bp)
Overview 1 RT 1: 53399-56515 bp Neighborhood of RT #1 [53399, 56515] FNR1 RVT-G2L Feature: gene Location: 53399-53638 bp Feature: gene Location: 53901-54680 bp Feature: domain Description: FNR1 Location: 53925-54663 bp Feature: domain Description: FNR1 Location: 5392 5-54663 bp Feature: gene Location: 54723-55928 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 54939-55614 bp Feature: RT Description: RVT-G2 L Note: G2 L RT Location: 54939-55614 bp Feature: gene Location: 55939-56331 bp Feature: gene Location: 56315-56515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FNR1 (cd06195), RVT-G2L