myRT

myRT report for GCA_013419115.1_ASM1341911v1

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Seq: VPAT01000016.1 Acinetobacter sp. YH12103 NODE_16_length_56681_cov_54.046823, whole genome shotgun sequence (56681 bp)
Overview 1 RT 1: 35798-41674 bp Neighborhood of RT #1 [35798, 41674] KAP_NTPase RVT-UG2 T5orf172 Feature: gene Location: 35798-36559 bp Feature: gene Location: 36574-38373 bp Feature: domain Description: KAP_NTPase Location: 36616-37735 bp Feature: domain Description: KAP_NTPase Location: 3661 6-37735 bp Feature: gene Location: 38680-40080 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 38917-39811 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3891 7-3981 1 bp Feature: gene Location: 40468-41382 bp Feature: domain Description: T5orf172 Location: 40993-41317 bp Feature: domain Description: T5orf1 72 Location: 40993-41 31 7 bp Feature: gene Location: 41387-41674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KAP_NTPase (pfam07693), RVT-UG2, T5orf172 (smart00974)

Seq: VPAT01000022.1 Acinetobacter sp. YH12103 NODE_22_length_49704_cov_57.843940, whole genome shotgun sequence (49704 bp)
Overview 1 RT 1: 22156-26042 bp Neighborhood of RT #1 [22156, 26128] InsE PHA02517 RVT-GII GIIM PHA02517 Tn7_Tnp_TnsA_N Feature: gene Location: 22156-22473 bp Feature: domain Description: InsE Location: 22171-22465 bp Feature: domain Description: InsE Location: 2 2 171-2 2 465 bp Feature: gene Location: 22473-22910 bp Feature: domain Description: PHA02517 Location: 22539-22890 bp Feature: domain Description: PHA02 517 Location: 2 2 539-2 2 890 bp Feature: gene Location: 23403-24644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23601-24258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3601-2 42 58 bp Feature: domain Description: GIIM Note: maturase Location: 24336-24567 bp Feature: domain Description: GIIM Note: maturase Location: 2 4336-2 4567 bp Feature: gene Location: 24697-25209 bp Feature: domain Description: PHA02517 Location: 24724-25189 bp Feature: domain Description: PHA02 517 Location: 2 472 4-2 5189 bp Feature: gene Location: 25460-26128 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 25886-26042 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 2 5886-2 6042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tn7_Tnp_TnsA_N (pfam08722)

Seq: VPAT01000048.1 Acinetobacter sp. YH12103 NODE_48_length_14910_cov_34.826355, whole genome shotgun sequence (14910 bp)
Overview 1 RT 1: 7128-10975 bp Neighborhood of RT #1 [7128, 10995] HTH_1 PBP2_DntR_NahR_LinR_like DDE_Tnp_IS66_C RVT_N RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 7128-8021 bp Feature: domain Description: HTH_1 Location: 7143-7314 bp Feature: domain Description: HTH_1 Location: 7143 -73 14 bp Feature: domain Description: PBP2_DntR_NahR_LinR_like Location: 7413-8010 bp Feature: domain Description: PBP2_DntR_NahR_LinR_like Location: 7413 -8010 bp Feature: gene Location: 8095-8313 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8179-8290 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8179-8290 bp Feature: gene Location: 8426-10102 bp Feature: domain Description: RVT_N Location: 8486-8729 bp Feature: domain Description: RVT_N Location: 8486-8729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8774-9410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8774-9410 bp Feature: domain Description: GIIM Note: maturase Location: 9464-9695 bp Feature: domain Description: GIIM Note: maturase Location: 9464-9695 bp Feature: gene Location: 10130-10309 bp Feature: gene Location: 10642-10995 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10645-10975 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10645-10975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_DntR_NahR_LinR_like (cd08459), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)