myRT

myRT report for GCA_013419215.1_ASM1341921v1

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Seq: VPAM01000042.1 Acinetobacter sp. YH12096 NODE_37_length_28818_cov_45.826182, whole genome shotgun sequence (28818 bp)
Overview 1 RT 1: 12825-17134 bp Neighborhood of RT #1 [12825, 17232] DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C HTH_XRE Feature: gene Location: 12825-14267 bp Feature: domain Description: DUF3287 Location: 12849-13008 bp Feature: domain Description: DUF3287 Location: 1 2849-1 3008 bp Feature: domain Description: LZ_Tnp_IS66 Location: 13038-13263 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 3038-1 3263 bp Feature: domain Description: zf-IS66 Location: 13287-13413 bp Feature: domain Description: zf-IS66 Location: 1 3287-1 341 3 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13455-14247 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 3455-1 4247 bp Feature: gene Location: 14593-14760 bp Feature: gene Location: 14842-16482 bp Feature: RT Description: RVT_N Location: 14875-15109 bp Feature: RT Description: RVT_N Location: 1 4875-1 51 09 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15154-15790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 54-1 5790 bp Feature: domain Description: GIIM Note: maturase Location: 15844-16075 bp Feature: domain Description: GIIM Note: maturase Location: 1 5844-1 6075 bp Feature: gene Location: 16596-16814 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 16680-16791 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 6680-1 6791 bp Feature: gene Location: 16993-17232 bp Feature: domain Description: HTH_XRE Location: 17002-17134 bp Feature: domain Description: HTH_XRE Location: 1 7002-1 71 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), HTH_XRE (smart00530)