myRT

myRT report for GCA_013419235.1_ASM1341923v1

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Seq: VPAO01000053.1 Acinetobacter sp. YH12098 NODE_51_length_21573_cov_255.044577, whole genome shotgun sequence (21573 bp)
Overview 1 RT 1: 5769-10078 bp Neighborhood of RT #1 [5769, 10176] DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C HTH_XRE Feature: gene Location: 5769-7211 bp Feature: domain Description: DUF3287 Location: 5793-5952 bp Feature: domain Description: DUF3287 Location: 5793-5952 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5982-6207 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5982-6207 bp Feature: domain Description: zf-IS66 Location: 6231-6357 bp Feature: domain Description: zf-IS66 Location: 6231 -6357 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6399-7191 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6399-71 91 bp Feature: gene Location: 7537-7704 bp Feature: gene Location: 7786-9426 bp Feature: RT Description: RVT_N Location: 7819-8053 bp Feature: RT Description: RVT_N Location: 781 9-8053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8098-8734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8098-8734 bp Feature: domain Description: GIIM Note: maturase Location: 8788-9019 bp Feature: domain Description: GIIM Note: maturase Location: 8788-901 9 bp Feature: gene Location: 9540-9758 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9624-9735 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9624-9735 bp Feature: gene Location: 9937-10176 bp Feature: domain Description: HTH_XRE Location: 9946-10078 bp Feature: domain Description: HTH_XRE Location: 9946-1 0078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), HTH_XRE (smart00530)