myRT

myRT report for GCA_013419355.1_ASM1341935v1

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Seq: VPAG01000031.1 Acinetobacter sp. YH12087 NODE_28_length_34344_cov_15.263670, whole genome shotgun sequence (34344 bp)
Overview 1 RT 1: 18141-21680 bp Neighborhood of RT #1 [18141, 21709] HMA HMA RVT_N RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 18141-18335 bp Feature: domain Description: HMA Location: 18150-18318 bp Feature: domain Description: HMA Location: 1 81 50-1 831 8 bp Feature: gene Location: 18512-18757 bp Feature: domain Description: HMA Location: 18554-18734 bp Feature: domain Description: HMA Location: 1 8554-1 8734 bp Feature: gene Location: 18814-19326 bp Feature: RT Description: RVT_N Location: 18874-19117 bp Feature: RT Description: RVT_N Location: 1 8874-1 91 1 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19162-19297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 62-1 9297 bp Feature: gene Location: 19866-21245 bp Feature: domain Description: LZ_Tnp_IS66 Location: 20016-20241 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2001 6-20241 bp Feature: domain Description: zf-IS66 Location: 20265-20391 bp Feature: domain Description: zf-IS66 Location: 20265-20391 bp Feature: domain Description: DDE_Tnp_IS66 Location: 20433-21225 bp Feature: domain Description: DDE_Tnp_IS66 Location: 20433-21 225 bp Feature: gene Location: 21320-21709 bp Feature: domain Description: TnpB_IS66 Location: 21392-21680 bp Feature: domain Description: TnpB_IS66 Location: 21 392-21 680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), RVT_N (pfam13655), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)