myRT

myRT report for GCA_013419455.1_ASM1341945v1

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Seq: VPAA01000055.1 Acinetobacter sp. YH12080 NODE_53_length_21572_cov_177.290697, whole genome shotgun sequence (21572 bp)
Overview 1 RT 1: 11398-15785 bp Neighborhood of RT #1 [11398, 15805] HTH_XRE RVT_N RVT-GII GIIM DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 11398-11637 bp Feature: domain Description: HTH_XRE Location: 11407-11539 bp Feature: domain Description: HTH_XRE Location: 1 1 407-1 1 539 bp Feature: gene Location: 11641-11829 bp Feature: gene Location: 12148-13788 bp Feature: RT Description: RVT_N Location: 12181-12415 bp Feature: RT Description: RVT_N Location: 1 21 81 -1 241 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12460-13096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2460-1 3096 bp Feature: domain Description: GIIM Note: maturase Location: 13150-13381 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 50-1 3381 bp Feature: gene Location: 13851-14030 bp Feature: gene Location: 14363-15805 bp Feature: domain Description: DUF3287 Location: 14387-14546 bp Feature: domain Description: DUF3287 Location: 1 4387-1 4546 bp Feature: domain Description: LZ_Tnp_IS66 Location: 14576-14801 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 4576-1 4801 bp Feature: domain Description: zf-IS66 Location: 14825-14951 bp Feature: domain Description: zf-IS66 Location: 1 4825-1 4951 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14993-15785 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 4993-1 5785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)