myRT

myRT report for GCA_013419515.1_ASM1341951v1

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Seq: VOZZ01000016.1 Acinetobacter sp. YH12079 NODE_16_length_44283_cov_44.387897, whole genome shotgun sequence (44283 bp)
Overview 1 RT 1: 34107-38950 bp Neighborhood of RT #1 [34107, 38979] HTH_XRE RVT_N RVT-GII GIIM DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 34107-34346 bp Feature: domain Description: HTH_XRE Location: 34116-34248 bp Feature: domain Description: HTH_XRE Location: 341 1 6-34248 bp Feature: gene Location: 34350-34538 bp Feature: gene Location: 34857-36533 bp Feature: RT Description: RVT_N Location: 34917-35160 bp Feature: RT Description: RVT_N Location: 3491 7-351 60 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35205-35841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35205-35841 bp Feature: domain Description: GIIM Note: maturase Location: 35895-36126 bp Feature: domain Description: GIIM Note: maturase Location: 35895-361 26 bp Feature: gene Location: 37073-38515 bp Feature: domain Description: DUF3287 Location: 37097-37256 bp Feature: domain Description: DUF3287 Location: 37097-37256 bp Feature: domain Description: LZ_Tnp_IS66 Location: 37286-37511 bp Feature: domain Description: LZ_Tnp_IS66 Location: 37286-3751 1 bp Feature: domain Description: zf-IS66 Location: 37535-37661 bp Feature: domain Description: zf-IS66 Location: 37535-37661 bp Feature: domain Description: DDE_Tnp_IS66 Location: 37703-38495 bp Feature: domain Description: DDE_Tnp_IS66 Location: 37703-38495 bp Feature: gene Location: 38590-38979 bp Feature: domain Description: TnpB_IS66 Location: 38662-38950 bp Feature: domain Description: TnpB_IS66 Location: 38662-38950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)