myRT

myRT report for GCA_013419625.1_ASM1341962v1

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Seq: VOZT01000038.1 Acinetobacter sp. YH12070 NODE_36_length_34175_cov_41.911037, whole genome shotgun sequence (34175 bp)
Overview 1 RT 1: 18141-21225 bp Neighborhood of RT #1 [18141, 21245] HMA HMA RVT_N RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 18141-18335 bp Feature: domain Description: HMA Location: 18150-18318 bp Feature: domain Description: HMA Location: 1 81 50-1 831 8 bp Feature: gene Location: 18512-18757 bp Feature: domain Description: HMA Location: 18554-18734 bp Feature: domain Description: HMA Location: 1 8554-1 8734 bp Feature: gene Location: 18814-19326 bp Feature: domain Description: RVT_N Location: 18874-19117 bp Feature: domain Description: RVT_N Location: 1 8874-1 91 1 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19162-19297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 62-1 9297 bp Feature: gene Location: 19354-19533 bp Feature: gene Location: 19866-21245 bp Feature: domain Description: LZ_Tnp_IS66 Location: 20016-20241 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2001 6-20241 bp Feature: domain Description: zf-IS66 Location: 20265-20391 bp Feature: domain Description: zf-IS66 Location: 20265-20391 bp Feature: domain Description: DDE_Tnp_IS66 Location: 20433-21225 bp Feature: domain Description: DDE_Tnp_IS66 Location: 20433-21 225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), RVT_N (pfam13655), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: VOZT01000045.1 Acinetobacter sp. YH12070 NODE_43_length_27094_cov_56.340676, whole genome shotgun sequence (27094 bp)
Overview 1 RT 1: 23435-26967 bp Neighborhood of RT #1 [23435, 26969] T5orf172 RVT-UG2 KAP_NTPase Feature: gene Location: 23435-23722 bp Feature: gene Location: 23727-24641 bp Feature: domain Description: T5orf172 Location: 24252-24576 bp Feature: domain Description: T5orf172 Location: 2 42 52 -2 4576 bp Feature: gene Location: 25029-26429 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 25266-26160 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 52 66-2 6160 bp Feature: gene Location: 26736-26969 bp Feature: domain Description: KAP_NTPase Location: 26778-26967 bp Feature: domain Description: KAP_NTPase Location: 2 6778-2 6967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T5orf172 (smart00974), RVT-UG2, KAP_NTPase (pfam07693)

Seq: VOZT01000009.1 Acinetobacter sp. YH12070 NODE_8_length_92775_cov_58.072414, whole genome shotgun sequence (92775 bp)
Overview 1 RT 1: 70707-76952 bp Neighborhood of RT #1 [70707, 76952] RVT-Retrons valS Feature: gene Location: 70707-71579 bp Feature: gene Location: 71579-71899 bp Feature: gene Location: 72133-73152 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72358-72892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 723 58-72892 bp Feature: gene Location: 73202-76096 bp Feature: domain Description: valS Location: 73220-76088 bp Feature: domain Description: valS Location: 73 220-76088 bp Feature: gene Location: 76281-76952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, valS (TIGR00422)