myRT

myRT report for GCA_013419685.1_ASM1341968v1

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Seq: VOZQ01000033.1 Acinetobacter sp. YH12066 NODE_33_length_35635_cov_72.343247, whole genome shotgun sequence (35635 bp)
Overview 1 RT 1: 30445-34291 bp Neighborhood of RT #1 [30445, 34299] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 30445-31110 bp Feature: gene Location: 31246-31758 bp Feature: domain Description: PHA02517 Location: 31273-31738 bp Feature: domain Description: PHA0251 7 Location: 31 273-31 738 bp Feature: gene Location: 31811-33052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32009-32666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32009-32666 bp Feature: domain Description: GIIM Note: maturase Location: 32744-32975 bp Feature: domain Description: GIIM Note: maturase Location: 32744-32975 bp Feature: gene Location: 33545-33982 bp Feature: domain Description: PHA02517 Location: 33608-33962 bp Feature: domain Description: PHA0251 7 Location: 33608-33962 bp Feature: gene Location: 33982-34299 bp Feature: domain Description: InsE Location: 33997-34291 bp Feature: domain Description: InsE Location: 33997-34291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: VOZQ01000038.1 Acinetobacter sp. YH12066 NODE_38_length_28221_cov_40.115363, whole genome shotgun sequence (28221 bp)
Overview 1 RT 1: 12417-16726 bp Neighborhood of RT #1 [12417, 16824] DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C HTH_XRE Feature: gene Location: 12417-13859 bp Feature: domain Description: DUF3287 Location: 12441-12600 bp Feature: domain Description: DUF32 87 Location: 12 441-12 600 bp Feature: domain Description: LZ_Tnp_IS66 Location: 12630-12855 bp Feature: domain Description: LZ_Tnp_IS66 Location: 12 630-12 855 bp Feature: domain Description: zf-IS66 Location: 12879-13005 bp Feature: domain Description: zf-IS66 Location: 12 879-13005 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13047-13839 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13047-13839 bp Feature: gene Location: 14185-14352 bp Feature: gene Location: 14434-16074 bp Feature: RT Description: RVT_N Location: 14467-14701 bp Feature: RT Description: RVT_N Location: 14467-14701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14746-15382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14746-15382 bp Feature: domain Description: GIIM Note: maturase Location: 15436-15667 bp Feature: domain Description: GIIM Note: maturase Location: 15436-15667 bp Feature: gene Location: 16188-16406 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 16272-16383 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 162 72 -16383 bp Feature: gene Location: 16585-16824 bp Feature: domain Description: HTH_XRE Location: 16594-16726 bp Feature: domain Description: HTH_XRE Location: 16594-1672 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), HTH_XRE (smart00530)

Seq: VOZQ01000059.1 Acinetobacter sp. YH12066 NODE_59_length_13185_cov_94.117016, whole genome shotgun sequence (13185 bp)
Overview 1 RT 1: 6041-9141 bp Neighborhood of RT #1 [6041, 9149] RVT-Retrons YiaG Feature: gene Location: 6041-6607 bp Feature: gene Location: 6803-7429 bp Feature: gene Location: 7662-8387 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7701-8235 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7701-823 5 bp Feature: gene Location: 8562-8714 bp Feature: gene Location: 8877-9149 bp Feature: domain Description: YiaG Location: 8916-9141 bp Feature: domain Description: YiaG Location: 8916-9141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, YiaG (COG2944)