myRT

myRT report for GCA_013419795.1_ASM1341979v1

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Seq: VOZJ01000024.1 Acinetobacter sp. YH12054 NODE_23_length_30594_cov_58.972265, whole genome shotgun sequence (30594 bp)
Overview 1 RT 1: 9592-12001 bp Neighborhood of RT #1 [9592, 12018] DDE_Tnp_IS66 RVT_N RVT-GII HMA HMA Feature: gene Location: 9592-10293 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9610-10273 bp Feature: domain Description: DDE_Tnp_IS66 Location: 961 0-1 0273 bp Feature: gene Location: 10619-10786 bp Feature: gene Location: 10833-11345 bp Feature: RT Description: RVT_N Location: 10893-11136 bp Feature: RT Description: RVT_N Location: 1 0893-1 1 1 36 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11181-11316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 81 -1 1 31 6 bp Feature: gene Location: 11402-11647 bp Feature: domain Description: HMA Location: 11444-11624 bp Feature: domain Description: HMA Location: 1 1 444-1 1 624 bp Feature: gene Location: 11824-12018 bp Feature: domain Description: HMA Location: 11833-12001 bp Feature: domain Description: HMA Location: 1 1 833-1 2001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HMA (pfam00403), DDE_Tnp_IS66 (pfam03050)

Seq: VOZJ01000025.1 Acinetobacter sp. YH12054 NODE_24_length_29740_cov_62.686725, whole genome shotgun sequence (29740 bp)
Overview 1 RT 1: 77-2792 bp Neighborhood of RT #1 [77, 2800] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 77-328 bp Feature: domain Description: PHA02517 Location: 104-260 bp Feature: domain Description: PHA02 517 Location: 104-2 60 bp Feature: gene Location: 381-1622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-12 36 bp Feature: domain Description: GIIM Note: maturase Location: 1314-1545 bp Feature: domain Description: GIIM Note: maturase Location: 1314-1545 bp Feature: gene Location: 2115-2552 bp Feature: domain Description: PHA02517 Location: 2181-2532 bp Feature: domain Description: PHA02 517 Location: 2 181-2 532 bp Feature: gene Location: 2552-2800 bp Feature: domain Description: InsE Location: 2585-2792 bp Feature: domain Description: InsE Location: 2 585-2 792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388)