myRT

myRT report for GCA_013419875.1_ASM1341987v1

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Seq: VOZH01000028.1 Acinetobacter sp. YH12049 NODE_28_length_49932_cov_48.234153, whole genome shotgun sequence (49932 bp)
Overview 1 RT 1: 35530-39819 bp Neighborhood of RT #1 [35530, 39830] pfam03781 Avd_like RVT-DGRs gp18 Feature: gene Location: 35530-36783 bp Feature: domain Description: pfam03781 Location: 35977-36295 bp Feature: domain Description: pfam03781 Location: 35977-36295 bp Feature: gene Location: 36852-37199 bp Feature: domain Description: Avd_like Location: 36873-37179 bp Feature: domain Description: Avd_like Location: 36873-371 79 bp Feature: gene Location: 37490-38584 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37700-38315 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37700-3831 5 bp Feature: gene Location: 38578-39021 bp Feature: gene Location: 39033-39830 bp Feature: domain Description: gp18 Location: 39048-39819 bp Feature: domain Description: gp1 8 Location: 39048-3981 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), Avd_like (cd16376), RVT-DGRs, gp18 (COG4672)

Seq: VOZH01000093.1 Acinetobacter sp. YH12049 NODE_93_length_2521_cov_50.455305, whole genome shotgun sequence (2521 bp)
Overview 1 RT 1: 2-2499 bp Neighborhood of RT #1 [2, 2519] COG4584 HMA RVT_N RVT-GII DDE_Tnp_IS66 Feature: gene Location: 2-646 bp Feature: domain Description: COG4584 Location: 5-644 bp Feature: domain Description: COG4584 Location: 5-644 bp Feature: gene Location: 905-1150 bp Feature: domain Description: HMA Location: 947-1127 bp Feature: domain Description: HMA Location: 947-112 7 bp Feature: gene Location: 1207-1719 bp Feature: RT Description: RVT_N Location: 1267-1510 bp Feature: RT Description: RVT_N Location: 12 67-1510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555-1690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555-1690 bp Feature: gene Location: 1747-1926 bp Feature: gene Location: 2259-2519 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2265-2499 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 65-2 499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, DDE_Tnp_IS66 (pfam03050), COG4584 (Transposase ), HMA (pfam00403)