myRT

myRT report for GCA_013420145.1_ASM1342014v1

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Seq: VOYT01000013.1 Acinetobacter sp. YH12021 NODE_13_length_60111_cov_56.154758, whole genome shotgun sequence (60111 bp)
Overview 1 RT 1: 51001-54969 bp Neighborhood of RT #1 [51001, 54969] HsdM PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 51001-51600 bp Feature: domain Description: HsdM Location: 51007-51568 bp Feature: domain Description: HsdM Location: 51 007-51 568 bp Feature: gene Location: 51866-52366 bp Feature: domain Description: PHA02517 Location: 51995-52346 bp Feature: domain Description: PHA0251 7 Location: 51 995-52346 bp Feature: gene Location: 52859-54100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53057-53714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53057-5371 4 bp Feature: domain Description: GIIM Note: maturase Location: 53792-54023 bp Feature: domain Description: GIIM Note: maturase Location: 53792-54023 bp Feature: gene Location: 54153-54563 bp Feature: domain Description: PHA02517 Location: 54180-54558 bp Feature: domain Description: PHA0251 7 Location: 541 80-54558 bp Feature: gene Location: 54838-54969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: VOYT01000044.1 Acinetobacter sp. YH12021 NODE_44_length_5171_cov_19.091990, whole genome shotgun sequence (5171 bp)
Overview 1 RT 1: 14-4964 bp Neighborhood of RT #1 [14, 4964] DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 14-190 bp Feature: domain Description: DDE_Tnp_IS66 Location: 17-170 bp Feature: domain Description: DDE_Tnp_IS66 Location: 17-170 bp Feature: gene Location: 516-683 bp Feature: gene Location: 730-2406 bp Feature: RT Description: RVT_N Location: 790-1033 bp Feature: RT Description: RVT_N Location: 790-1033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1078-1714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1078-1714 bp Feature: domain Description: GIIM Note: maturase Location: 1768-1999 bp Feature: domain Description: GIIM Note: maturase Location: 1768-1999 bp Feature: gene Location: 2520-2738 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2604-2715 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 604-2 715 bp Feature: gene Location: 3618-4964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)