myRT

myRT report for GCA_013420285.1_ASM1342028v1

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Seq: VOYM01000188.1 Acinetobacter sp. YH01019 NODE_185_length_1240_cov_463.816712, whole genome shotgun sequence (1240 bp)
Overview 1 RT 1: 54-1240 bp Neighborhood of RT #1 [54, 1239] RVT_N RVT-GII Feature: gene Location: 54-221 bp Feature: gene Location: 283-1239 bp Feature: RT Description: RVT_N Location: 328-571 bp Feature: RT Description: RVT_N Location: 328-571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 616-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 6-1 240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: VOYM01000048.1 Acinetobacter sp. YH01019 NODE_45_length_30059_cov_70.751236, whole genome shotgun sequence (30059 bp)
Overview 1 RT 1: 4898-11547 bp Neighborhood of RT #1 [4898, 11547] TIGR02646 COG3950 RVT-Retrons MobC Feature: gene Location: 4898-5542 bp Feature: domain Description: TIGR02646 Location: 4991-5300 bp Feature: domain Description: TIGR02 646 Location: 4991-5300 bp Feature: gene Location: 5547-7091 bp Feature: domain Description: COG3950 Location: 5721-6870 bp Feature: domain Description: COG3950 Location: 572 1-6870 bp Feature: gene Location: 7092-8033 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7203-7797 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72 03-7797 bp Feature: gene Location: 8633-9142 bp Feature: domain Description: MobC Location: 8894-8978 bp Feature: domain Description: MobC Location: 8894-8978 bp Feature: gene Location: 9139-11547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, MobC (pfam05713)

Seq: VOYM01000007.1 Acinetobacter sp. YH01019 NODE_6_length_70526_cov_77.366127, whole genome shotgun sequence (70526 bp)
Overview 1 RT 1: 68358-70485 bp Neighborhood of RT #1 [68358, 70523] tsf DDE_Tnp_IS66_C RVT-GII GIIM HNH Feature: gene Location: 68358-69233 bp Feature: domain Description: tsf Location: 68361-69216 bp Feature: domain Description: tsf Location: 683 61-69216 bp Feature: gene Location: 69364-69582 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 69448-69559 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 69448-69559 bp Feature: gene Location: 69696-70523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69714-69831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69714-6983 1 bp Feature: domain Description: GIIM Note: maturase Location: 69885-70116 bp Feature: domain Description: GIIM Note: maturase Location: 69885-70116 bp Feature: domain Description: HNH Note: nucleases Location: 70368-70485 bp Feature: domain Description: HNH Note: nucleases Location: 703 68-70485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tsf (TIGR00116), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), HNH (pfam01844)