myRT

myRT report for GCA_013421955.1_ASM1342195v1

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Seq: PXGJ01000001.1 Escherichia coli strain VC1413m Contig1, whole genome shotgun sequence (334162 bp)
Overview 1 RT 1: 331970-334134 bp Neighborhood of RT #1 [331970, 334160] Antirestrict DUF932 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 331970-332455 bp Feature: domain Description: Antirestrict Location: 332168-332453 bp Feature: domain Description: Antirestrict Location: 3321 68-332453 bp Feature: gene Location: 332510-332896 bp Feature: domain Description: DUF932 Location: 332516-332861 bp Feature: domain Description: DUF932 Location: 33251 6-332861 bp Feature: gene Location: 333069-334160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333240-333438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333240-333438 bp Feature: domain Description: Intron_maturas2 Location: 333564-333789 bp Feature: domain Description: Intron_maturas2 Location: 333564-333789 bp Feature: domain Description: HNHc Note: nucleases Location: 333984-334134 bp Feature: domain Description: HNHc Note: nucleases Location: 333984-3341 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: PXGJ01000129.1 Escherichia coli strain VC1413m Contig129, whole genome shotgun sequence (1536 bp)
Overview 1 RT 1: 3-1346 bp Neighborhood of RT #1 [3, 1444] DUF932 RVT-GII Feature: gene Location: 3-137 bp Feature: domain Description: DUF932 Location: 15-129 bp Feature: domain Description: DUF932 Location: 15-12 9 bp Feature: gene Location: 629-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890-1346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII