myRT

myRT report for GCA_013422565.1_ASM1342256v1

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Seq: PXHO01000103.1 Escherichia coli strain 14ER2392 Contig103, whole genome shotgun sequence (2252 bp)
Overview 1 RT 1: 82-1710 bp Neighborhood of RT #1 [82, 1721] RVT-GII DUF932 DUF905 Feature: gene Location: 82-498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-460 bp Feature: gene Location: 990-1388 bp Feature: domain Description: DUF932 Location: 1098-1380 bp Feature: domain Description: DUF932 Location: 1 098-1 380 bp Feature: gene Location: 1488-1721 bp Feature: domain Description: DUF905 Location: 1512-1710 bp Feature: domain Description: DUF905 Location: 1 51 2-1 71 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), RVT-GII, DUF932 (pfam06067)

Seq: PXHO01000017.1 Escherichia coli strain 14ER2392 Contig17, whole genome shotgun sequence (109588 bp)
Overview 1 RT 1: 107259-109496 bp Neighborhood of RT #1 [107259, 109496] DUF932 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107259-107504 bp Feature: gene Location: 107504-107890 bp Feature: domain Description: DUF932 Location: 107510-107855 bp Feature: domain Description: DUF932 Location: 107510-107855 bp Feature: gene Location: 108063-109334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108066-108612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108066-108612 bp Feature: domain Description: Intron_maturas2 Location: 108738-108963 bp Feature: domain Description: Intron_maturas2 Location: 108738-108963 bp Feature: domain Description: HNHc Note: nucleases Location: 109158-109308 bp Feature: domain Description: HNHc Note: nucleases Location: 109158-109308 bp Feature: gene Location: 109326-109496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)