myRT

myRT report for GCA_013422805.1_ASM1342280v1

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Seq: WSAM01000010.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B3172 NODE_10_length_153341_cov_82.847931, whole genome shotgun sequence (153341 bp)
Overview 1 RT 1: 62178-69031 bp Neighborhood of RT #1 [62178, 69033] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 62178-62723 bp Feature: gene Location: 62726-64426 bp Feature: domain Description: 5 Location: 63950-64244 bp Feature: domain Description: 5 Location: 63950-64244 bp Feature: gene Location: 65333-66097 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 65456-65909 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 65456-65909 bp Feature: gene Location: 66421-66927 bp Feature: domain Description: PRK10201 Location: 66424-66922 bp Feature: domain Description: PRK1 0201 Location: 66424-66922 bp Feature: gene Location: 67051-69033 bp Feature: domain Description: PRK05658 Location: 67189-69031 bp Feature: domain Description: PRK05658 Location: 671 89-69031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: WSAM01000025.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B3172 NODE_25_length_81304_cov_90.834423, whole genome shotgun sequence (81304 bp)
Overview 1 RT 1: 31797-36722 bp Neighborhood of RT #1 [31797, 36730] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31797-32519 bp Feature: domain Description: INT_P4_C Location: 31917-32448 bp Feature: domain Description: INT_P4_C Location: 31917-32 448 bp Feature: gene Location: 32844-33806 bp Feature: gene Location: 33806-34741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: gene Location: 34989-35198 bp Feature: gene Location: 35543-36730 bp Feature: domain Description: PRK10473 Location: 35546-36722 bp Feature: domain Description: PRK10473 Location: 35546-3672 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)