myRT

myRT report for GCA_013423585.1_ASM1342358v1

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Seq: JAATOL010000030.1 Escherichia coli strain G43 N_30_length_12907, whole genome shotgun sequence (12907 bp)
Overview 1 RT 1: 1416-4962 bp Neighborhood of RT #1 [1416, 5054] RVT-Retrons Psu PRK09678 PRK09678 Feature: gene Location: 1416-1607 bp Feature: gene Location: 1594-2271 bp Feature: gene Location: 2273-3772 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2984-3539 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2984-3539 bp Feature: gene Location: 3962-4534 bp Feature: domain Description: Psu Location: 3980-4517 bp Feature: domain Description: Psu Location: 3980-451 7 bp Feature: gene Location: 4608-5054 bp Feature: domain Description: PRK09678 Location: 4617-4689 bp Feature: domain Description: PRK09678 Location: 461 7-4689 bp Feature: domain Description: PRK09678 Location: 4812-4962 bp Feature: domain Description: PRK09678 Location: 481 2-4962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JAATOL010000065.1 Escherichia coli strain G43 N_65_length_7750, whole genome shotgun sequence (7750 bp)
Overview 1 RT 1: 1999-5882 bp Neighborhood of RT #1 [1999, 5887] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 1999-2715 bp Feature: domain Description: rph Location: 2002-2710 bp Feature: domain Description: rph Location: 2 002 -2 710 bp Feature: gene Location: 2767-3423 bp Feature: domain Description: pyrE Location: 2785-3418 bp Feature: domain Description: pyrE Location: 2 785-3418 bp Feature: gene Location: 3721-4680 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3856-4405 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3856-4405 bp Feature: gene Location: 4726-5322 bp Feature: domain Description: slmA Location: 4732-5308 bp Feature: domain Description: slmA Location: 4732 -5308 bp Feature: gene Location: 5429-5887 bp Feature: domain Description: dut Location: 5435-5882 bp Feature: domain Description: dut Location: 5435-5882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)