myRT

myRT report for GCA_013426935.1_ASM1342693v1

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Seq: JACDJD010000029.1 Rhizobium leguminosarum strain T88 c_000000000029, whole genome shotgun sequence (39045 bp)
Overview 1 RT 1: 33843-38181 bp Neighborhood of RT #1 [33843, 38181] ArdC RVT_N RVT-GII GIIM HNH ArdC Feature: gene Location: 33843-34427 bp Feature: gene Location: 34717-35163 bp Feature: domain Description: ArdC Location: 34720-35002 bp Feature: domain Description: ArdC Location: 34720-35002 bp Feature: gene Location: 35542-37233 bp Feature: domain Description: RVT_N Location: 35587-35833 bp Feature: domain Description: RVT_N Location: 35587-35833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35881-36520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35881 -36520 bp Feature: domain Description: GIIM Note: maturase Location: 36598-36826 bp Feature: domain Description: GIIM Note: maturase Location: 36598-36826 bp Feature: domain Description: HNH Note: nucleases Location: 37060-37186 bp Feature: domain Description: HNH Note: nucleases Location: 37060-371 86 bp Feature: gene Location: 37205-37984 bp Feature: domain Description: ArdC Location: 37310-37970 bp Feature: domain Description: ArdC Location: 3731 0-37970 bp Feature: gene Location: 38008-38181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JACDJD010000032.1 Rhizobium leguminosarum strain T88 c_000000000032, whole genome shotgun sequence (27519 bp)
Overview 1 RT 1: 19338-23397 bp Neighborhood of RT #1 [19338, 23483] DDE_Tnp_1 Glyco_hydro_28 RVT-GII PRK08322 Cellulase Feature: gene Location: 19338-19514 bp Feature: domain Description: DDE_Tnp_1 Location: 19347-19488 bp Feature: domain Description: DDE_Tnp_1 Location: 19347-19488 bp Feature: gene Location: 19595-21229 bp Feature: domain Description: Glyco_hydro_28 Location: 20156-21044 bp Feature: domain Description: Glyco_hydro_2 8 Location: 2 0156-2 1044 bp Feature: gene Location: 21256-21756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21310-21556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1310-2 1556 bp Feature: gene Location: 21761-22186 bp Feature: gene Location: 22224-23483 bp Feature: domain Description: PRK08322 Location: 22272-22395 bp Feature: domain Description: PRK0832 2 Location: 2 2 2 72 -2 2 395 bp Feature: domain Description: Cellulase Location: 22428-23397 bp Feature: domain Description: Cellulase Location: 2 2 42 8-2 3397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), Glyco_hydro_28 (pfam00295), RVT-GII, PRK08322 (acetolactate synthase large subunit), Cellulase (pfam00150)

Seq: JACDJD010000038.1 Rhizobium leguminosarum strain T88 c_000000000038, whole genome shotgun sequence (15815 bp)
Overview 1 RT 1: 286-2208 bp Neighborhood of RT #1 [286, 2363] Rve RVT-GII GIIM PhdYeFM_antitox YAcAr Feature: gene Location: 286-591 bp Feature: domain Description: Rve Location: 352-541 bp Feature: domain Description: Rve Location: 3 52-541 bp Feature: gene Location: 731-1132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743 -875 bp Feature: domain Description: GIIM Note: maturase Location: 956-1130 bp Feature: domain Description: GIIM Note: maturase Location: 956-113 0 bp Feature: gene Location: 1157-1480 bp Feature: domain Description: PhdYeFM_antitox Location: 1223-1361 bp Feature: domain Description: PhdYeFM_antitox Location: 1223 -13 61 bp Feature: gene Location: 1500-2363 bp Feature: domain Description: YAcAr Location: 2010-2208 bp Feature: domain Description: YAcAr Location: 2010-2208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), PhdYeFM_antitox (pfam02604), YAcAr