myRT

myRT report for GCA_013432835.1_ASM1343283v1

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Seq: JABEOJ010000003.1 Listeria monocytogenes strain 412 NODE_3_length_289572_cov_20.517383, whole genome shotgun sequence (289572 bp)
Overview 1 RT 1: 12976-22854 bp Neighborhood of RT #1 [12976, 22868] COG4932 CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB COG4932 PRK06482 RVT-GII LysR TpcC Feature: gene Location: 12976-18732 bp Feature: domain Description: COG4932 Location: 13015-16801 bp Feature: domain Description: COG4932 Location: 1 301 5-1 6801 bp Feature: domain Description: CollagenBindB Location: 16855-17137 bp Feature: domain Description: CollagenBindB Location: 1 6855-1 71 37 bp Feature: domain Description: CollagenBindB Location: 17152-17428 bp Feature: domain Description: CollagenBindB Location: 1 71 52-1 7428 bp Feature: domain Description: CollagenBindB Location: 17443-17698 bp Feature: domain Description: CollagenBindB Location: 1 7443-1 7698 bp Feature: domain Description: CollagenBindB Location: 17713-17986 bp Feature: domain Description: CollagenBindB Location: 1 771 3-1 7986 bp Feature: domain Description: CollagenBindB Location: 18001-18256 bp Feature: domain Description: CollagenBindB Location: 1 8001 -1 8256 bp Feature: domain Description: CollagenBindB Location: 18274-18523 bp Feature: domain Description: CollagenBindB Location: 1 8274-1 8523 bp Feature: domain Description: COG4932 Location: 18592-18727 bp Feature: domain Description: COG4932 Location: 1 8592-1 8727 bp Feature: gene Location: 19405-19749 bp Feature: domain Description: PRK06482 Location: 19486-19738 bp Feature: domain Description: PRK06482 Location: 1 9486-1 9738 bp Feature: gene Location: 19644-20363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19965-20361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9965-20361 bp Feature: gene Location: 20818-21723 bp Feature: domain Description: LysR Location: 20821-21700 bp Feature: domain Description: LysR Location: 20821 -21 700 bp Feature: gene Location: 21957-22868 bp Feature: domain Description: TpcC Location: 22188-22854 bp Feature: domain Description: TpcC Location: 221 88-22854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4932 (Uncharacterized surface anchored protein ), CollagenBindB (cl15753), PRK06482 (SDR family oxidoreductase), RVT-GII, LysR (COG0583), TpcC (pfam12642)