myRT

myRT report for GCA_013432915.1_ASM1343291v1

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Seq: JABEOL010000005.1 Listeria monocytogenes strain 253 NODE_5_length_289449_cov_44.794969, whole genome shotgun sequence (289449 bp)
Overview 1 RT 1: 12979-22857 bp Neighborhood of RT #1 [12979, 22871] COG4932 CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB COG4932 PRK06482 RVT-GII LysR TpcC Feature: gene Location: 12979-18735 bp Feature: domain Description: COG4932 Location: 13018-16804 bp Feature: domain Description: COG4932 Location: 1 301 8-1 6804 bp Feature: domain Description: CollagenBindB Location: 16858-17140 bp Feature: domain Description: CollagenBindB Location: 1 6858-1 71 40 bp Feature: domain Description: CollagenBindB Location: 17155-17431 bp Feature: domain Description: CollagenBindB Location: 1 71 55-1 7431 bp Feature: domain Description: CollagenBindB Location: 17446-17701 bp Feature: domain Description: CollagenBindB Location: 1 7446-1 7701 bp Feature: domain Description: CollagenBindB Location: 17716-17989 bp Feature: domain Description: CollagenBindB Location: 1 771 6-1 7989 bp Feature: domain Description: CollagenBindB Location: 18004-18259 bp Feature: domain Description: CollagenBindB Location: 1 8004-1 8259 bp Feature: domain Description: CollagenBindB Location: 18277-18526 bp Feature: domain Description: CollagenBindB Location: 1 8277-1 8526 bp Feature: domain Description: COG4932 Location: 18595-18730 bp Feature: domain Description: COG4932 Location: 1 8595-1 8730 bp Feature: gene Location: 19408-19752 bp Feature: domain Description: PRK06482 Location: 19489-19741 bp Feature: domain Description: PRK06482 Location: 1 9489-1 9741 bp Feature: gene Location: 19647-20366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19968-20364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9968-20364 bp Feature: gene Location: 20821-21726 bp Feature: domain Description: LysR Location: 20824-21703 bp Feature: domain Description: LysR Location: 20824-21 703 bp Feature: gene Location: 21960-22871 bp Feature: domain Description: TpcC Location: 22191-22857 bp Feature: domain Description: TpcC Location: 221 91 -22857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4932 (Uncharacterized surface anchored protein ), CollagenBindB (cl15753), PRK06482 (SDR family oxidoreductase), RVT-GII, LysR (COG0583), TpcC (pfam12642)