myRT

myRT report for GCA_013432925.1_ASM1343292v1

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Seq: JABMDY010000004.1 Listeria monocytogenes strain 234 NODE_4_length_289433_cov_36.283482, whole genome shotgun sequence (289433 bp)
Overview 1 RT 1: 12977-22855 bp Neighborhood of RT #1 [12977, 22869] COG4932 CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB COG4932 PRK06482 RVT-GII LysR TpcC Feature: gene Location: 12977-18733 bp Feature: domain Description: COG4932 Location: 13016-16802 bp Feature: domain Description: COG4932 Location: 1 301 6-1 6802 bp Feature: domain Description: CollagenBindB Location: 16856-17138 bp Feature: domain Description: CollagenBindB Location: 1 6856-1 71 38 bp Feature: domain Description: CollagenBindB Location: 17153-17429 bp Feature: domain Description: CollagenBindB Location: 1 71 53-1 7429 bp Feature: domain Description: CollagenBindB Location: 17444-17699 bp Feature: domain Description: CollagenBindB Location: 1 7444-1 7699 bp Feature: domain Description: CollagenBindB Location: 17714-17987 bp Feature: domain Description: CollagenBindB Location: 1 771 4-1 7987 bp Feature: domain Description: CollagenBindB Location: 18002-18257 bp Feature: domain Description: CollagenBindB Location: 1 8002-1 8257 bp Feature: domain Description: CollagenBindB Location: 18275-18524 bp Feature: domain Description: CollagenBindB Location: 1 8275-1 8524 bp Feature: domain Description: COG4932 Location: 18587-18728 bp Feature: domain Description: COG4932 Location: 1 8587-1 8728 bp Feature: gene Location: 19406-19750 bp Feature: domain Description: PRK06482 Location: 19487-19739 bp Feature: domain Description: PRK06482 Location: 1 9487-1 9739 bp Feature: gene Location: 19645-20364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19966-20362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9966-20362 bp Feature: gene Location: 20819-21724 bp Feature: domain Description: LysR Location: 20822-21701 bp Feature: domain Description: LysR Location: 20822-21 701 bp Feature: gene Location: 21958-22869 bp Feature: domain Description: TpcC Location: 22189-22855 bp Feature: domain Description: TpcC Location: 221 89-22855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4932 (Uncharacterized surface anchored protein ), CollagenBindB (cl15753), PRK06482 (SDR family oxidoreductase), RVT-GII, LysR (COG0583), TpcC (pfam12642)

Seq: JABMDY010000006.1 Listeria monocytogenes strain 234 NODE_6_length_225335_cov_33.007073, whole genome shotgun sequence (225335 bp)
Overview 1 RT 1: 7380-11729 bp Neighborhood of RT #1 [7380, 11731] PRK09034 RVT-UG2 KOG0882 KOG0882 Feature: gene Location: 7380-8741 bp Feature: domain Description: PRK09034 Location: 7383-8730 bp Feature: domain Description: PRK09034 Location: 7383-8730 bp Feature: gene Location: 8786-9178 bp Feature: gene Location: 9292-10662 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 9520-10342 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 952 0-10342 bp Feature: gene Location: 10844-11122 bp Feature: gene Location: 11147-11731 bp Feature: domain Description: KOG0882 Location: 11198-11504 bp Feature: domain Description: KOG0882 Location: 11198-11504 bp Feature: domain Description: KOG0882 Location: 11591-11729 bp Feature: domain Description: KOG0882 Location: 11591-1172 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09034 (aspartate kinase; Reviewed), RVT-UG2, KOG0882 (KOG0882, Cyclophilin-related peptidyl-prolyl cis-trans isomerase )