myRT

myRT report for GCA_013433095.1_ASM1343309v1

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Seq: JABEOR010000004.1 Listeria monocytogenes strain 161 N4_289061nt_13.272228, whole genome shotgun sequence (289061 bp)
Overview 1 RT 1: 266188-276081 bp Neighborhood of RT #1 [266188, 276086] TpcC LysR RVT-GII PRK06482 COG4932 CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB COG4932 Feature: gene Location: 266188-267105 bp Feature: domain Description: TpcC Location: 266425-267091 bp Feature: domain Description: TpcC Location: 266425-267091 bp Feature: gene Location: 267339-268244 bp Feature: domain Description: LysR Location: 267342-268221 bp Feature: domain Description: LysR Location: 267342-268221 bp Feature: gene Location: 268699-269418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 269020-269416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 269020-26941 6 bp Feature: gene Location: 269313-269657 bp Feature: domain Description: PRK06482 Location: 269394-269646 bp Feature: domain Description: PRK06482 Location: 269394-269646 bp Feature: gene Location: 270330-276086 bp Feature: domain Description: COG4932 Location: 270369-274155 bp Feature: domain Description: COG4932 Location: 270369-2741 55 bp Feature: domain Description: CollagenBindB Location: 274209-274491 bp Feature: domain Description: CollagenBindB Location: 274209-274491 bp Feature: domain Description: CollagenBindB Location: 274506-274782 bp Feature: domain Description: CollagenBindB Location: 274506-274782 bp Feature: domain Description: CollagenBindB Location: 274797-275052 bp Feature: domain Description: CollagenBindB Location: 274797-275052 bp Feature: domain Description: CollagenBindB Location: 275067-275340 bp Feature: domain Description: CollagenBindB Location: 275067-275340 bp Feature: domain Description: CollagenBindB Location: 275355-275610 bp Feature: domain Description: CollagenBindB Location: 275355-27561 0 bp Feature: domain Description: CollagenBindB Location: 275628-275877 bp Feature: domain Description: CollagenBindB Location: 275628-275877 bp Feature: domain Description: COG4932 Location: 275946-276081 bp Feature: domain Description: COG4932 Location: 275946-276081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TpcC (pfam12642), LysR (COG0583), RVT-GII, PRK06482 (SDR family oxidoreductase), COG4932 (Uncharacterized surface anchored protein ), CollagenBindB (cl15753)