myRT

myRT report for GCA_013449685.1_ASM1344968v1

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Seq: JACDSF010000056.1 Pectobacterium brasiliense strain CFBP8736 Pectobacterium_brasiliense_CFBP8736_contig_56, whole genome shotgun sequence (22305 bp)
Overview 1 RT 1: 9975-14611 bp Neighborhood of RT #1 [9975, 14664] PRK09692 PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 9975-11234 bp Feature: domain Description: PRK09692 Location: 9984-11181 bp Feature: domain Description: PRK09692 Location: 9984-1 1 1 81 bp Feature: gene Location: 11540-11956 bp Feature: domain Description: PHA02517 Location: 11543-11948 bp Feature: domain Description: PHA0251 7 Location: 1 1 543-1 1 948 bp Feature: gene Location: 12082-13605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12355-13087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2355-1 3087 bp Feature: domain Description: GIIM Note: maturase Location: 13162-13360 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 62-1 3360 bp Feature: gene Location: 13899-14114 bp Feature: gene Location: 14197-14664 bp Feature: domain Description: Tra5 Location: 14323-14611 bp Feature: domain Description: Tra5 Location: 1 4323-1 461 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), PRK09692 (Integrase; provisional)