myRT

myRT report for GCA_013504725.1_ASM1350472v1

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Seq: NXCA01000017.1 Klebsiella pneumoniae subsp. pneumoniae strain H1122 NODE_17, whole genome shotgun sequence (75495 bp)
Overview 1 RT 1: 60033-63281 bp Neighborhood of RT #1 [60033, 63295] RVT-GII PRK10276 Feature: gene Location: 60033-60254 bp Feature: gene Location: 60516-60746 bp Feature: gene Location: 60980-62467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61385-62075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 385-62075 bp Feature: gene Location: 62473-62640 bp Feature: gene Location: 62870-63295 bp Feature: domain Description: PRK10276 Location: 62873-63281 bp Feature: domain Description: PRK1 0276 Location: 62873-63281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NXCA01000008.1 Klebsiella pneumoniae subsp. pneumoniae strain H1122 NODE_8, whole genome shotgun sequence (303495 bp)
Overview 1 RT 1: 31991-38844 bp Neighborhood of RT #1 [31991, 38861] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31991-32656 bp Feature: domain Description: INT_P4_C Location: 32096-32654 bp Feature: domain Description: INT_P4_C Location: 32 096-32 654 bp Feature: gene Location: 32917-33357 bp Feature: domain Description: Integrase_1 Location: 32923-33139 bp Feature: domain Description: Integrase_1 Location: 32 92 3-33139 bp Feature: gene Location: 33414-35492 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33822-34266 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3382 2 -342 66 bp Feature: gene Location: 35492-38101 bp Feature: domain Description: FimD Location: 35549-38090 bp Feature: domain Description: FimD Location: 35549-38090 bp Feature: gene Location: 38133-38861 bp Feature: domain Description: FimC Location: 38181-38844 bp Feature: domain Description: FimC Location: 38181-38844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)