myRT

myRT report for GCA_013522665.1_HS_1

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Seq: JAAMRH010000023.1 Pseudomonas carnis strain HS1 NODE_23_length_117706_cov_74.038970, whole genome shotgun sequence (117706 bp)
Overview 1 RT 1: 4901-10143 bp Neighborhood of RT #1 [4901, 10172] ACR3 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 4901-5863 bp Feature: domain Description: ACR3 Location: 4916-5843 bp Feature: domain Description: ACR3 Location: 491 6-5843 bp Feature: gene Location: 5902-6036 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5908-6019 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5908-601 9 bp Feature: gene Location: 6228-7889 bp Feature: RT Description: RVT_N Location: 6273-6516 bp Feature: RT Description: RVT_N Location: 6273-651 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6561-7197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6561 -71 97 bp Feature: domain Description: GIIM Note: maturase Location: 7254-7482 bp Feature: domain Description: GIIM Note: maturase Location: 7254-7482 bp Feature: gene Location: 8447-9775 bp Feature: domain Description: LZ_Tnp_IS66 Location: 8579-8786 bp Feature: domain Description: LZ_Tnp_IS66 Location: 8579-8786 bp Feature: domain Description: zf-IS66 Location: 8825-8939 bp Feature: domain Description: zf-IS66 Location: 8825-8939 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8981-9755 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8981 -9755 bp Feature: gene Location: 9837-10172 bp Feature: domain Description: TnpB_IS66 Location: 9855-10143 bp Feature: domain Description: TnpB_IS66 Location: 9855-1 01 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACR3 (COG0798), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)

Seq: JAAMRH010000068.1 Pseudomonas carnis strain HS1 NODE_68_length_1930_cov_153.677759, whole genome shotgun sequence (1930 bp)
Overview 1 RT 1: 117-1691 bp Neighborhood of RT #1 [117, 1858] RVT-GII GIIM Feature: gene Location: 117-287 bp Feature: gene Location: 437-1858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-1409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-1409 bp Feature: domain Description: GIIM Note: maturase Location: 1463-1691 bp Feature: domain Description: GIIM Note: maturase Location: 1463-1691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)