myRT

myRT report for GCA_013522865.1_82B1

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Seq: JAAMQW010000011.1 Pseudomonas fulva strain 82B1 NODE_11_length_138779_cov_47.202146, whole genome shotgun sequence (138779 bp)
Overview 1 RT 1: 135305-138197 bp Neighborhood of RT #1 [135305, 138280] IS5 RVT-GII GIIM Feature: gene Location: 135305-136042 bp Feature: gene Location: 136483-137016 bp Feature: domain Description: IS5 Location: 136555-136990 bp Feature: domain Description: IS5 Location: 1 36555-1 36990 bp Feature: gene Location: 137027-138280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137240-137897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 37240-1 37897 bp Feature: domain Description: GIIM Note: maturase Location: 137975-138197 bp Feature: domain Description: GIIM Note: maturase Location: 1 37975-1 381 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT-GII, GIIM (pfam08388)

Seq: JAAMQW010000016.1 Pseudomonas fulva strain 82B1 NODE_16_length_125827_cov_50.088512, whole genome shotgun sequence (125827 bp)
Overview 1 RT 1: 111024-113915 bp Neighborhood of RT #1 [111024, 113915] RVT-G2L4 Feature: gene Location: 111024-111272 bp Feature: gene Location: 111404-111598 bp Feature: gene Location: 111615-112916 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 111879-112467 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 111879-112 467 bp Feature: gene Location: 113312-113575 bp Feature: gene Location: 113769-113915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4

Seq: JAAMQW010000039.1 Pseudomonas fulva strain 82B1 NODE_39_length_36291_cov_43.406952, whole genome shotgun sequence (36291 bp)
Overview 1 RT 1: 2-4674 bp Neighborhood of RT #1 [2, 4817] MDR7 RVT-GII GIIM HTH_Tnp_1 HTH_Tnp_1 Tra5 Feature: gene Location: 2-1045 bp Feature: domain Description: MDR7 Location: 119-1040 bp Feature: domain Description: MDR7 Location: 119-1040 bp Feature: gene Location: 1316-1501 bp Feature: gene Location: 1702-3057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1993-2608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1993 -2608 bp Feature: domain Description: GIIM Note: maturase Location: 2665-2878 bp Feature: domain Description: GIIM Note: maturase Location: 2665-2878 bp Feature: gene Location: 3397-3918 bp Feature: domain Description: HTH_Tnp_1 Location: 3424-3580 bp Feature: domain Description: HTH_Tnp_1 Location: 3 424-3 580 bp Feature: domain Description: HTH_Tnp_1 Location: 3601-3826 bp Feature: domain Description: HTH_Tnp_1 Location: 3 601-3 826 bp Feature: gene Location: 3915-4817 bp Feature: domain Description: Tra5 Location: 4023-4674 bp Feature: domain Description: Tra5 Location: 4023 -4674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MDR7 (cd08276), RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527), Tra5 (COG2801)