myRT

myRT report for GCA_013602285.1_ASM1360228v1

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Seq: WIVK01000005.1 Staphylococcus sciuri strain GDM7P051A C-1_NDMS04239_1.clean_(paired)_contig_5, whole genome shotgun sequence (19619 bp)
Overview 1 RT 1: 182-3639 bp 2 RT 2: 6043-11575 bp Neighborhood of RT #1 [182, 3641] SR_ResInv HTH_XRE RVT-Retrons HTH_ARSR cad Neighborhood of RT #2 [6043, 11595] DUF536 PRK06848 RVT-Retrons PinE POD-like_MBL-fold RHOD RHOD Feature: gene Location: 182-376 bp Feature: domain Description: SR_ResInv Location: 188-356 bp Feature: domain Description: SR_ResInv Location: 1 88-356 bp Feature: gene Location: 1075-1374 bp Feature: domain Description: HTH_XRE Location: 1087-1252 bp Feature: domain Description: HTH_XRE Location: 1 087-1 252 bp Feature: gene Location: 1376-2266 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1523-2051 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 523-2051 bp Feature: gene Location: 2658-3005 bp Feature: domain Description: HTH_ARSR Location: 2802-2991 bp Feature: domain Description: HTH_ARSR Location: 2802-2991 bp Feature: gene Location: 3024-3641 bp Feature: domain Description: cad Location: 3060-3639 bp Feature: domain Description: cad Location: 3060-3639 bp Feature: gene Location: 6043-6765 bp Feature: domain Description: DUF536 Location: 6331-6490 bp Feature: domain Description: DUF536 Location: 6331 -6490 bp Feature: gene Location: 6914-7336 bp Feature: domain Description: PRK06848 Location: 6929-7331 bp Feature: domain Description: PRK06848 Location: 6929-7331 bp Feature: gene Location: 7478-9229 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7604-8204 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7604-8204 bp Feature: gene Location: 9512-10090 bp Feature: domain Description: PinE Location: 9515-10070 bp Feature: domain Description: PinE Location: 951 5-1 0070 bp Feature: gene Location: 10261-11595 bp Feature: domain Description: POD-like_MBL-fold Location: 10270-10852 bp Feature: domain Description: POD-like_MBL-fold Location: 1 0270-1 0852 bp Feature: domain Description: RHOD Location: 11086-11158 bp Feature: domain Description: RHOD Location: 1 1 086-1 1 1 58 bp Feature: domain Description: RHOD Location: 11344-11575 bp Feature: domain Description: RHOD Location: 1 1 344-1 1 575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, SR_ResInv (cd03768), cad (TIGR00779), POD-like_MBL-fold (cd07724), RHOD (smart00450), DUF536 (pfam04394), PRK06848 (cytidine deaminase), PinE (COG1961)