myRT

myRT report for GCA_013603265.1_ASM1360326v1

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Seq: JAANJS010000002.1 Klebsiella pneumoniae strain F65 N_2_length_354530, whole genome shotgun sequence (354530 bp)
Overview 1 RT 1: 234825-241678 bp Neighborhood of RT #1 [234825, 241695] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 234825-235490 bp Feature: domain Description: INT_P4_C Location: 234930-235488 bp Feature: domain Description: INT_P4_C Location: 234930-235488 bp Feature: gene Location: 235751-236191 bp Feature: domain Description: Integrase_1 Location: 235757-235973 bp Feature: domain Description: Integrase_1 Location: 235757-235973 bp Feature: gene Location: 236248-238326 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 236656-237100 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 236656-2371 00 bp Feature: gene Location: 238326-240935 bp Feature: domain Description: FimD Location: 238383-240924 bp Feature: domain Description: FimD Location: 238383-240924 bp Feature: gene Location: 240967-241695 bp Feature: domain Description: FimC Location: 241015-241678 bp Feature: domain Description: FimC Location: 241 01 5-241 678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JAANJS010000055.1 Klebsiella pneumoniae strain F65 N_55_length_8937, whole genome shotgun sequence (8937 bp)
Overview 1 RT 1: 5325-8866 bp Neighborhood of RT #1 [5325, 8866] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 5325-5597 bp Feature: domain Description: InsE Location: 5334-5583 bp Feature: domain Description: InsE Location: 5334-5583 bp Feature: gene Location: 5653-6078 bp Feature: domain Description: PHA02517 Location: 5677-6013 bp Feature: domain Description: PHA02 517 Location: 5677-6013 bp Feature: gene Location: 6670-8193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6943-7675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6943-7675 bp Feature: domain Description: GIIM Note: maturase Location: 7750-7948 bp Feature: domain Description: GIIM Note: maturase Location: 7750-7948 bp Feature: gene Location: 8358-8516 bp Feature: domain Description: PHA02517 Location: 8361-8481 bp Feature: domain Description: PHA02 517 Location: 8361-8481 bp Feature: gene Location: 8735-8866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JAANJS010000077.1 Klebsiella pneumoniae strain F65 N_77_length_1892, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII