myRT

myRT report for GCA_013603415.1_ASM1360341v1

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Seq: JAANJU010000001.1 Klebsiella pneumoniae strain F36 N_1_length_354749, whole genome shotgun sequence (354749 bp)
Overview 1 RT 1: 112836-119704 bp Neighborhood of RT #1 [112836, 119706] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112836-113564 bp Feature: domain Description: FimC Location: 112884-113547 bp Feature: domain Description: FimC Location: 1 1 2884-1 1 3547 bp Feature: gene Location: 113596-116205 bp Feature: domain Description: FimD Location: 113653-116194 bp Feature: domain Description: FimD Location: 1 1 3653-1 1 61 94 bp Feature: gene Location: 116205-118283 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116613-117057 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 661 3-1 1 7057 bp Feature: gene Location: 118340-118780 bp Feature: domain Description: Integrase_1 Location: 118346-118562 bp Feature: domain Description: Integrase_1 Location: 1 1 8346-1 1 8562 bp Feature: gene Location: 119041-119706 bp Feature: domain Description: INT_P4_C Location: 119146-119704 bp Feature: domain Description: INT_P4_C Location: 1 1 91 46-1 1 9704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: JAANJU010000051.1 Klebsiella pneumoniae strain F36 N_51_length_8937, whole genome shotgun sequence (8937 bp)
Overview 1 RT 1: 5325-8866 bp Neighborhood of RT #1 [5325, 8866] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 5325-5597 bp Feature: domain Description: InsE Location: 5334-5583 bp Feature: domain Description: InsE Location: 5334-5583 bp Feature: gene Location: 5653-6078 bp Feature: domain Description: PHA02517 Location: 5677-6013 bp Feature: domain Description: PHA02 517 Location: 5677-6013 bp Feature: gene Location: 6670-8193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6943-7675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6943-7675 bp Feature: domain Description: GIIM Note: maturase Location: 7750-7948 bp Feature: domain Description: GIIM Note: maturase Location: 7750-7948 bp Feature: gene Location: 8358-8516 bp Feature: domain Description: PHA02517 Location: 8361-8481 bp Feature: domain Description: PHA02 517 Location: 8361-8481 bp Feature: gene Location: 8735-8866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JAANJU010000074.1 Klebsiella pneumoniae strain F36 N_74_length_1893, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 60-1892 bp Neighborhood of RT #1 [60, 1892] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: gene Location: 1701-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII