myRT

myRT report for GCA_013604785.1_ASM1360478v1

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Seq: JAANKP010000022.1 Klebsiella pneumoniae strain B55 N_22_length_78037, whole genome shotgun sequence (78037 bp)
Overview 1 RT 1: 25754-28938 bp Neighborhood of RT #1 [25754, 28938] PRK10276 RVT-GII Feature: gene Location: 25754-26179 bp Feature: domain Description: PRK10276 Location: 25757-26165 bp Feature: domain Description: PRK1 0276 Location: 25757-261 65 bp Feature: gene Location: 26297-26530 bp Feature: gene Location: 26581-28092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26986-27700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26986-27700 bp Feature: gene Location: 28326-28556 bp Feature: gene Location: 28615-28938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: JAANKP010000009.1 Klebsiella pneumoniae strain B55 N_9_length_228790, whole genome shotgun sequence (228790 bp)
Overview 1 RT 1: 588-7441 bp Neighborhood of RT #1 [588, 7458] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 588-1253 bp Feature: domain Description: INT_P4_C Location: 693-1251 bp Feature: domain Description: INT_P4_C Location: 693-12 51 bp Feature: gene Location: 1514-1954 bp Feature: domain Description: Integrase_1 Location: 1520-1736 bp Feature: domain Description: Integrase_1 Location: 152 0-1736 bp Feature: gene Location: 2011-4089 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2419-2863 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 419-2 863 bp Feature: gene Location: 4089-6698 bp Feature: domain Description: FimD Location: 4146-6687 bp Feature: domain Description: FimD Location: 4146-6687 bp Feature: gene Location: 6730-7458 bp Feature: domain Description: FimC Location: 6763-7441 bp Feature: domain Description: FimC Location: 6763-7441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)