myRT

myRT report for GCA_013605175.1_ASM1360517v1

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Seq: JAANKY010000012.1 Escherichia coli strain H61 N_12_length_134378, whole genome shotgun sequence (134378 bp)
Overview 1 RT 1: 104131-108422 bp Neighborhood of RT #1 [104131, 108422] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 104131-105393 bp Feature: domain Description: YesM Location: 104644-105385 bp Feature: domain Description: YesM Location: 1 04644-1 05385 bp Feature: gene Location: 105423-105593 bp Feature: gene Location: 105943-106464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105949-106231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 05949-1 06231 bp Feature: domain Description: GIIM Note: maturase Location: 106279-106459 bp Feature: domain Description: GIIM Note: maturase Location: 1 06279-1 06459 bp Feature: gene Location: 106492-107031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106822-106900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 06822-1 06900 bp Feature: gene Location: 107062-107259 bp Feature: gene Location: 107517-108422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JAANKY010000014.1 Escherichia coli strain H61 N_14_length_121188, whole genome shotgun sequence (121188 bp)
Overview 1 RT 1: 28816-35059 bp Neighborhood of RT #1 [28816, 35196] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28816-29082 bp Feature: domain Description: Phage_integrase Location: 28882-28978 bp Feature: domain Description: Phage_integrase Location: 2 8882 -2 8978 bp Feature: gene Location: 29165-29635 bp Feature: gene Location: 29982-33191 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30510-30999 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30510-30999 bp Feature: domain Description: nitrilase Location: 32505-33102 bp Feature: domain Description: nitrilase Location: 32 505-33102 bp Feature: gene Location: 33486-34289 bp Feature: domain Description: AbiEi_3_N Location: 33519-33780 bp Feature: domain Description: AbiEi_3_N Location: 33519-33780 bp Feature: domain Description: AbiEi_3 Location: 33792-34248 bp Feature: domain Description: AbiEi_3 Location: 33792 -342 48 bp Feature: gene Location: 34276-35196 bp Feature: domain Description: AbiEii Location: 34318-35059 bp Feature: domain Description: AbiEii Location: 34318-35059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JAANKY010000095.1 Escherichia coli strain H61 N_95_length_2272, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)