myRT

myRT report for GCA_013605765.1_ASM1360576v1

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Seq: JAANLI010000010.1 Escherichia coli strain G24 N_10_length_169727, whole genome shotgun sequence (169727 bp)
Overview 1 RT 1: 108678-114709 bp Neighborhood of RT #1 [108678, 114709] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 108678-109598 bp Feature: domain Description: AbiEii Location: 108720-109461 bp Feature: domain Description: AbiEii Location: 1 08720-1 09461 bp Feature: gene Location: 109585-110388 bp Feature: domain Description: AbiEi_3_N Location: 109618-109879 bp Feature: domain Description: AbiEi_3_N Location: 1 0961 8-1 09879 bp Feature: domain Description: AbiEi_3 Location: 109891-110347 bp Feature: domain Description: AbiEi_3 Location: 1 09891 -1 1 0347 bp Feature: gene Location: 110683-113892 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 111211-111700 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 1 21 1 -1 1 1 700 bp Feature: domain Description: nitrilase Location: 113206-113803 bp Feature: domain Description: nitrilase Location: 1 1 3206-1 1 3803 bp Feature: gene Location: 114053-114193 bp Feature: domain Description: Phage_ASH Location: 114080-114173 bp Feature: domain Description: Phage_ASH Location: 1 1 4080-1 1 41 73 bp Feature: gene Location: 114239-114709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JAANLI010000003.1 Escherichia coli strain G24 N_3_length_257491, whole genome shotgun sequence (257491 bp)
Overview 1 RT 1: 227219-230251 bp Neighborhood of RT #1 [227219, 230251] RVT-GII GIIM RVT-GII Feature: gene Location: 227219-227389 bp Feature: gene Location: 227527-227673 bp Feature: gene Location: 227772-228293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227778-228060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 7778-2 2 8060 bp Feature: domain Description: GIIM Note: maturase Location: 228108-228288 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 8108-2 2 82 88 bp Feature: gene Location: 228321-228860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228651-228729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 8651-2 2 872 9 bp Feature: gene Location: 228891-229088 bp Feature: gene Location: 229346-230251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAANLI010000796.1 Escherichia coli strain G24 N_796_length_251, whole genome shotgun sequence (251 bp)
Overview 1 RT 1: 2-251 bp Neighborhood of RT #1 [2, 250] RVT-GII Feature: gene Location: 2-250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII