myRT

myRT report for GCA_013606355.1_ASM1360635v1

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Seq: JAANLS010000026.1 Escherichia coli strain E7 N_26_length_68876, whole genome shotgun sequence (68876 bp)
Overview 1 RT 1: 28567-32449 bp Neighborhood of RT #1 [28567, 32454] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 28567-29283 bp Feature: domain Description: rph Location: 28570-29278 bp Feature: domain Description: rph Location: 28570-29278 bp Feature: gene Location: 29334-29990 bp Feature: domain Description: pyrE Location: 29352-29985 bp Feature: domain Description: pyrE Location: 29352-29985 bp Feature: gene Location: 30288-31247 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30423-30972 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30423-30972 bp Feature: gene Location: 31293-31889 bp Feature: domain Description: slmA Location: 31299-31875 bp Feature: domain Description: slmA Location: 31 299-31 875 bp Feature: gene Location: 31996-32454 bp Feature: domain Description: dut Location: 32002-32449 bp Feature: domain Description: dut Location: 32002-32449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: JAANLS010000005.1 Escherichia coli strain E7 N_5_length_218543, whole genome shotgun sequence (218543 bp)
Overview 1 RT 1: 203602-207214 bp Neighborhood of RT #1 [203602, 207279] EmrE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 203602-203931 bp Feature: domain Description: EmrE Location: 203620-203923 bp Feature: domain Description: EmrE Location: 2 0362 0-2 0392 3 bp Feature: gene Location: 204155-204601 bp Feature: domain Description: PHA02517 Location: 204158-204599 bp Feature: domain Description: PHA02 517 Location: 2 04158-2 04599 bp Feature: gene Location: 204718-206241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204991-205723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 04991-2 0572 3 bp Feature: domain Description: GIIM Note: maturase Location: 205798-205996 bp Feature: domain Description: GIIM Note: maturase Location: 2 05798-2 05996 bp Feature: gene Location: 206195-206620 bp Feature: gene Location: 206833-207279 bp Feature: domain Description: PHA02517 Location: 206947-207214 bp Feature: domain Description: PHA02 517 Location: 2 06947-2 072 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EmrE (pfam13536), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)