myRT

myRT report for GCA_013606965.1_ASM1360696v1

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Seq: JAANME010000011.1 Escherichia coli strain C39 N_11_length_179862, whole genome shotgun sequence (179862 bp)
Overview 1 RT 1: 97302-101243 bp Neighborhood of RT #1 [97302, 101243] RVT-Retrons Feature: gene Location: 97302-98441 bp Feature: gene Location: 98487-98654 bp Feature: gene Location: 98676-100448 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98835-99453 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98835-99453 bp Feature: gene Location: 100669-100812 bp Feature: gene Location: 101004-101243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JAANME010000051.1 Escherichia coli strain C39 N_51_length_11463, whole genome shotgun sequence (11463 bp)
Overview 1 RT 1: 7144-11017 bp Neighborhood of RT #1 [7144, 11388] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 7144-7320 bp Feature: gene Location: 7728-8432 bp Feature: domain Description: SLATT_5 Location: 7890-8400 bp Feature: domain Description: SLATT_5 Location: 7890-8400 bp Feature: gene Location: 8410-9780 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8638-9244 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8638-92 44 bp Feature: gene Location: 9893-10477 bp Feature: domain Description: Caudo_TAP Location: 10109-10466 bp Feature: domain Description: Caudo_TAP Location: 10109-10466 bp Feature: gene Location: 10486-11388 bp Feature: domain Description: Macro_Appr_pase Location: 10504-11017 bp Feature: domain Description: Macro_Appr_pase Location: 10504-11017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)

Seq: JAANME010000080.1 Escherichia coli strain C39 N_80_length_2663, whole genome shotgun sequence (2663 bp)
Overview 1 RT 1: 149-1955 bp Neighborhood of RT #1 [149, 2050] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 149-2050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1247 bp Feature: domain Description: Intron_maturas2 Location: 1361-1619 bp Feature: domain Description: Intron_maturas2 Location: 13 61-1619 bp Feature: domain Description: HNHc Note: nucleases Location: 1793-1955 bp Feature: domain Description: HNHc Note: nucleases Location: 1793 -1955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)