myRT

myRT report for GCA_013607235.1_ASM1360723v1

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Seq: JAANMJ010000011.1 Escherichia coli strain B45 N_11_length_145087, whole genome shotgun sequence (145087 bp)
Overview 1 RT 1: 12920-17013 bp Neighborhood of RT #1 [12920, 17078] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 12920-13966 bp Feature: domain Description: COG3547 Location: 12929-13850 bp Feature: domain Description: COG3547 Location: 1 2929-1 3850 bp Feature: gene Location: 14245-14451 bp Feature: gene Location: 14538-16061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14811-15543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 481 1 -1 5543 bp Feature: domain Description: GIIM Note: maturase Location: 15618-15816 bp Feature: domain Description: GIIM Note: maturase Location: 1 561 8-1 581 6 bp Feature: gene Location: 16015-16440 bp Feature: gene Location: 16653-17078 bp Feature: domain Description: PHA02517 Location: 16677-17013 bp Feature: domain Description: PHA0251 7 Location: 1 6677-1 701 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JAANMJ010000054.1 Escherichia coli strain B45 N_54_length_17352, whole genome shotgun sequence (17352 bp)
Overview 1 RT 1: 14761-17272 bp Neighborhood of RT #1 [14761, 17272] RVT-UG17 SLATT_5 Feature: gene Location: 14761-14898 bp Feature: gene Location: 14914-15048 bp Feature: gene Location: 15156-16526 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 15384-15990 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 15384-15990 bp Feature: gene Location: 16504-17055 bp Feature: domain Description: SLATT_5 Location: 16510-17026 bp Feature: domain Description: SLATT_5 Location: 16510-1702 6 bp Feature: gene Location: 17093-17272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: JAANMJ010000009.1 Escherichia coli strain B45 N_9_length_167559, whole genome shotgun sequence (167559 bp)
Overview 1 RT 1: 52944-56826 bp Neighborhood of RT #1 [52944, 56831] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 52944-53402 bp Feature: domain Description: dut Location: 52950-53397 bp Feature: domain Description: dut Location: 52950-53 3 97 bp Feature: gene Location: 53509-54105 bp Feature: domain Description: slmA Location: 53515-54091 bp Feature: domain Description: slmA Location: 53 515-54091 bp Feature: gene Location: 54151-55110 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 54286-54835 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 54286-5483 5 bp Feature: gene Location: 55408-56064 bp Feature: domain Description: pyrE Location: 55426-56059 bp Feature: domain Description: pyrE Location: 55426-56059 bp Feature: gene Location: 56115-56831 bp Feature: domain Description: rph Location: 56118-56826 bp Feature: domain Description: rph Location: 56118-56826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)