myRT

myRT report for GCA_013607495.1_ASM1360749v1

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Seq: JAANMM010000001.1 Escherichia coli strain A3 N_1_length_438270, whole genome shotgun sequence (438270 bp)
Overview 1 RT 1: 327119-333150 bp Neighborhood of RT #1 [327119, 333150] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 327119-328039 bp Feature: domain Description: AbiEii Location: 327161-327902 bp Feature: domain Description: AbiEii Location: 3271 61 -327902 bp Feature: gene Location: 328026-328829 bp Feature: domain Description: AbiEi_3_N Location: 328059-328320 bp Feature: domain Description: AbiEi_3_N Location: 328059-328320 bp Feature: domain Description: AbiEi_3 Location: 328332-328788 bp Feature: domain Description: AbiEi_3 Location: 328332-328788 bp Feature: gene Location: 329124-332333 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 329652-330141 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 329652-3301 41 bp Feature: domain Description: nitrilase Location: 331647-332244 bp Feature: domain Description: nitrilase Location: 331 647-332244 bp Feature: gene Location: 332494-332634 bp Feature: domain Description: Phage_ASH Location: 332521-332614 bp Feature: domain Description: Phage_ASH Location: 332521 -33261 4 bp Feature: gene Location: 332680-333150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JAANMM010000002.1 Escherichia coli strain A3 N_2_length_314334, whole genome shotgun sequence (314334 bp)
Overview 1 RT 1: 32031-35441 bp Neighborhood of RT #1 [32031, 35446] RVT-Retrons Q Feature: gene Location: 32031-32174 bp Feature: gene Location: 32282-32422 bp Feature: gene Location: 32490-33680 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32640-33222 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 640-332 2 2 bp Feature: gene Location: 33677-34384 bp Feature: gene Location: 34427-35446 bp Feature: domain Description: Q Location: 34430-35441 bp Feature: domain Description: Q Location: 34430-35441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536)

Seq: JAANMM010000072.1 Escherichia coli strain A3 N_72_length_2344, whole genome shotgun sequence (2344 bp)
Overview 1 RT 1: 83-2212 bp Neighborhood of RT #1 [83, 2212] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 83-1750 bp Feature: domain Description: RVT_N Location: 131-368 bp Feature: domain Description: RVT_N Location: 13 1-3 68 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1061 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1346 bp Feature: domain Description: GIIM Note: maturase Location: 1112-13 46 bp Feature: domain Description: HNHc Note: nucleases Location: 1556-1715 bp Feature: domain Description: HNHc Note: nucleases Location: 1556-1715 bp Feature: gene Location: 2030-2212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)