myRT

myRT report for GCA_013608555.1_ASM1360855v1

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Seq: JABFJC010000013.1 Escherichia coli strain CE1679 NODE_13_length_120261_cov_43.752737, whole genome shotgun sequence (120261 bp)
Overview 1 RT 1: 51618-57376 bp 2 RT 2: 82783-87383 bp Neighborhood of RT #1 [51618, 57441] HsdM PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [82783, 87646] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 51618-54041 bp Feature: domain Description: HsdM Location: 51639-53583 bp Feature: domain Description: HsdM Location: 51 639-53583 bp Feature: gene Location: 54300-54653 bp Feature: domain Description: PHA02517 Location: 54303-54648 bp Feature: domain Description: PHA0251 7 Location: 54303-54648 bp Feature: gene Location: 54848-56122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54872-55604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54872-55604 bp Feature: domain Description: GIIM Note: maturase Location: 55679-55877 bp Feature: domain Description: GIIM Note: maturase Location: 55679-55877 bp Feature: gene Location: 56324-56749 bp Feature: gene Location: 56962-57441 bp Feature: domain Description: PHA02517 Location: 57022-57376 bp Feature: domain Description: PHA0251 7 Location: 57022-57376 bp Feature: gene Location: 82783-82956 bp Feature: gene Location: 82990-83298 bp Feature: gene Location: 83285-84448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83399-84086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83399-84086 bp Feature: gene Location: 84774-85337 bp Feature: domain Description: Inovirus_Gp2 Location: 84831-85272 bp Feature: domain Description: Inovirus_Gp2 Location: 84831 -85272 bp Feature: gene Location: 86195-87646 bp Feature: domain Description: DUF3987 Location: 86306-87383 bp Feature: domain Description: DUF3987 Location: 86306-87383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)

Seq: JABFJC010000033.1 Escherichia coli strain CE1679 NODE_33_length_28111_cov_43.376792, whole genome shotgun sequence (28111 bp)
Overview 1 RT 1: 21763-24260 bp Neighborhood of RT #1 [21763, 24260] Asparaginase_2 RVT-GII Feature: gene Location: 21763-22794 bp Feature: domain Description: Asparaginase_2 Location: 21853-22786 bp Feature: domain Description: Asparaginase_2 Location: 2 1853-2 2 786 bp Feature: gene Location: 23121-23270 bp Feature: gene Location: 23318-23764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23624-23726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 362 4-2 372 6 bp Feature: gene Location: 23795-23992 bp Feature: gene Location: 24096-24260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII