myRT

myRT report for GCA_013609075.1_ASM1360907v1

Download annotations/find similar RTs

Seq: JABFJL010000001.1 Escherichia coli strain CE1634 NODE_1_length_462118_cov_61.511833, whole genome shotgun sequence (462118 bp)
Overview 1 RT 1: 215808-220653 bp 2 RT 2: 245669-251361 bp Neighborhood of RT #1 [215808, 220653] DUF3987 Inovirus_Gp2 RVT-GII Neighborhood of RT #2 [245669, 251819] InsE PHA02517 RVT-GII GIIM PHA02517 HsdM Feature: gene Location: 215808-217241 bp Feature: domain Description: DUF3987 Location: 215901-216978 bp Feature: domain Description: DUF3987 Location: 21 5901 -21 6978 bp Feature: gene Location: 218099-218662 bp Feature: domain Description: Inovirus_Gp2 Location: 218156-218597 bp Feature: domain Description: Inovirus_Gp2 Location: 21 81 56-21 8597 bp Feature: gene Location: 218988-220151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219102-219789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 91 02-21 9789 bp Feature: gene Location: 220138-220446 bp Feature: gene Location: 220480-220653 bp Feature: gene Location: 245669-245995 bp Feature: domain Description: InsE Location: 245672-245993 bp Feature: domain Description: InsE Location: 245672-245993 bp Feature: gene Location: 245995-246474 bp Feature: domain Description: PHA02517 Location: 246055-246409 bp Feature: domain Description: PHA0251 7 Location: 246055-246409 bp Feature: gene Location: 247066-248589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247339-248071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247339-248071 bp Feature: domain Description: GIIM Note: maturase Location: 248146-248344 bp Feature: domain Description: GIIM Note: maturase Location: 2481 46-248344 bp Feature: gene Location: 248754-249137 bp Feature: domain Description: PHA02517 Location: 248757-249132 bp Feature: domain Description: PHA0251 7 Location: 248757-2491 32 bp Feature: gene Location: 249360-251819 bp Feature: domain Description: HsdM Location: 249417-251361 bp Feature: domain Description: HsdM Location: 24941 7-251 361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), HsdM (COG0286)

Seq: JABFJL010000034.1 Escherichia coli strain CE1634 NODE_34_length_28111_cov_57.441464, whole genome shotgun sequence (28111 bp)
Overview 1 RT 1: 21763-24260 bp Neighborhood of RT #1 [21763, 24260] Asparaginase_2 RVT-GII Feature: gene Location: 21763-22794 bp Feature: domain Description: Asparaginase_2 Location: 21853-22786 bp Feature: domain Description: Asparaginase_2 Location: 2 1853-2 2 786 bp Feature: gene Location: 23121-23270 bp Feature: gene Location: 23318-23764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23624-23726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 362 4-2 372 6 bp Feature: gene Location: 23795-23992 bp Feature: gene Location: 24096-24260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII