myRT

myRT report for GCA_013609585.1_ASM1360958v1

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Seq: JABFJT010000001.1 Escherichia coli strain CE1636 NODE_1_length_462118_cov_40.979404, whole genome shotgun sequence (462118 bp)
Overview 1 RT 1: 210300-216059 bp 2 RT 2: 241466-246066 bp Neighborhood of RT #1 [210300, 216124] HsdM PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [241466, 246329] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 210300-212723 bp Feature: domain Description: HsdM Location: 210321-212265 bp Feature: domain Description: HsdM Location: 21 0321 -21 2265 bp Feature: gene Location: 212982-213335 bp Feature: domain Description: PHA02517 Location: 212985-213330 bp Feature: domain Description: PHA0251 7 Location: 21 2985-21 3330 bp Feature: gene Location: 213530-215053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213803-214535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 3803-21 4535 bp Feature: domain Description: GIIM Note: maturase Location: 214610-214808 bp Feature: domain Description: GIIM Note: maturase Location: 21 461 0-21 4808 bp Feature: gene Location: 215007-215432 bp Feature: gene Location: 215645-216124 bp Feature: domain Description: PHA02517 Location: 215705-216059 bp Feature: domain Description: PHA0251 7 Location: 21 5705-21 6059 bp Feature: gene Location: 241466-241639 bp Feature: gene Location: 241673-241981 bp Feature: gene Location: 241968-243131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242082-242769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242082-242769 bp Feature: gene Location: 243457-244020 bp Feature: domain Description: Inovirus_Gp2 Location: 243514-243955 bp Feature: domain Description: Inovirus_Gp2 Location: 24351 4-243955 bp Feature: gene Location: 244878-246329 bp Feature: domain Description: DUF3987 Location: 244989-246066 bp Feature: domain Description: DUF3987 Location: 244989-246066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)

Seq: JABFJT010000037.1 Escherichia coli strain CE1636 NODE_37_length_28111_cov_37.548548, whole genome shotgun sequence (28111 bp)
Overview 1 RT 1: 3719-6341 bp Neighborhood of RT #1 [3719, 6349] RVT-GII Asparaginase_2 Feature: gene Location: 3719-3904 bp Feature: gene Location: 4120-4317 bp Feature: gene Location: 4348-4794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4654-4756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4654-4756 bp Feature: gene Location: 4842-4991 bp Feature: gene Location: 5318-6349 bp Feature: domain Description: Asparaginase_2 Location: 5408-6341 bp Feature: domain Description: Asparaginase_2 Location: 5408-6341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Asparaginase_2 (pfam01112)