myRT

myRT report for GCA_013618575.1_ASM1361857v1

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Seq: JABSOA010000049.1 Escherichia coli strain L39 scaffold113, whole genome shotgun sequence (13660 bp)
Overview 1 RT 1: 10069-13626 bp Neighborhood of RT #1 [10069, 13626] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 10069-10197 bp Feature: gene Location: 10245-10526 bp Feature: domain Description: PHA02517 Location: 10251-10461 bp Feature: domain Description: PHA0251 7 Location: 1 0251 -1 0461 bp Feature: gene Location: 11118-12641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11391-12123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 391 -1 21 23 bp Feature: domain Description: GIIM Note: maturase Location: 12198-12396 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 98-1 2396 bp Feature: gene Location: 12758-13204 bp Feature: domain Description: PHA02517 Location: 12761-13202 bp Feature: domain Description: PHA0251 7 Location: 1 2761 -1 3202 bp Feature: gene Location: 13408-13626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JABSOA010000015.1 Escherichia coli strain L39 scaffold23, whole genome shotgun sequence (90814 bp)
Overview 1 RT 1: 36751-40633 bp Neighborhood of RT #1 [36751, 40638] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 36751-37467 bp Feature: domain Description: rph Location: 36754-37462 bp Feature: domain Description: rph Location: 36754-37462 bp Feature: gene Location: 37518-38174 bp Feature: domain Description: pyrE Location: 37536-38169 bp Feature: domain Description: pyrE Location: 37536-38169 bp Feature: gene Location: 38472-39431 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38607-39156 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38607-39156 bp Feature: gene Location: 39477-40073 bp Feature: domain Description: slmA Location: 39483-40059 bp Feature: domain Description: slmA Location: 39483-40059 bp Feature: gene Location: 40180-40638 bp Feature: domain Description: dut Location: 40186-40633 bp Feature: domain Description: dut Location: 40186-40633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)